LOC120554486


Basic Information

Item Value
gene id LOC120554486
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 5051007 ~ 5054982 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793405.1
AACTGGGTTAATAGTAGGTGAAGtatttacatttaaacacagcttaaTGATCCTCAAACATGTGTCACACCTTCTCGTGTGTGTCAACATGACCGTGGGTTACGACACTGCAAGTTCAAGAAATTGAAACAGAACAAAGCCTGGAAAAGTTAAGGTATGTCTATGCAGTTTGCCCTCACACAGAATCCCAACAGTTTTATTAACAGGATAATGACACAAAACCAATATTTTTTCAGAATGGTTTGCAACTGTGCACTGCAGCTGTAAAGTCAAGTAATGTAAGTAAGGACATTTTAATGTtgcctttatttaaccaggggTAACGACTAATTGGTATTAAAACAATCTATTTTTCTAGAGTATCCTggccaaaataaaacaaattacaaaGTTATTAGATtacaagaaaaatgttttttaaatgcgTCCTGTGACACCAGCTCCCAAAGGTTCAGGTGATTTTTACCACAATCCGAGCCGAGTGAGCAGCATACTTAAAAGTGAGAAATTGAGTTTGAACCACAAGGTATGGTACTCTTTGAGTGAAAGTCCCGAGTTGGCGTTGTCGACGTTTGACCTGTAATACAATTTTGCCGAGGCCTCTTCTGGCCCAGTTGCAAGAGCTAAAAGAAAAAACTTTGATTCAGGAGGTAAACAGAAACAGGAGTCCAACTGCATGCTTTCATCTCACATTTGGACAAAAATACAATTGATTTCCAGCACTGAGAACTATTGTTaatgtgttgcatgttttaattaaaacatgttgacACCTTTAAGATTTGCTCACAGTTTCAGTGTTaacattttttcaatgtttggaATTGACgtattgatttaaaagttgCTCATGGAACTAAGAGAAATCTCTGGCCGCTgttcaaactaaaaataaacaaagtgaAAGTTTGGACTTTCACACAGACGATACTGTTATTTAAGCATTCCTTTCCCGCATTTTGCCCAACTTCCTCATTACTTCAATCAGAAACCAAGGTCTTTGTCTACTAGATTTAGCTCTTCAAGTCACCTAAGGTAATCGCGTGCCTGTTTAAAGAAATAACAAAGAcatcttttcatttttatttaacaaaaggtGCACTGGAGAGTTTAAATGATCAAAACACAATGTGTTCCCAGACGTGCTAACCCTTTTTCATAGCAGAATCCCCTGAAACCCGATCTGTGTAAATAAAGTGACCCTTGAGCTTTATCAGCTCAAGCATGACACCAGGAAGTTAGTGCACATGGCTGAAGGTGAATCACACAACAATGGGCTTTAGAACTAAGCTATGCTGGAGTTTCCCCCTGGGTGTTGAAGGAGACAGGAGGGAGTAGGAGGAGTGACAGAGAGATGGATGTTAAAACAGAGATGAGACGCTGAAGGCTTGGAGTGAGCACTGATGAGGACACTGTAACTAAAAGACTCAGCCATGGAACATCCCAACTGCACCGACGTGGACCAACTGATAAAACGATATTACCTGCCTGTCTCCTACACCATCATCTTCATCGTGGGCCTGATGGGCAACATAACCTCCATTGGCATTTACGTGACAAAGCTGCGTCCCTGGAAGAGCAACAGCATCATCATGGTCAACCTGGCACTGACTGACCTCCTCTATGTTCTCAGCATGCCCTTCCTGGTCCACTACTACAGCAACGGGGAATCGTGGACCCTCGGCGACTTCATGTGCCGCTTTGTGCGCTTTGGCTTTCATTTTAACCTGTATGCAAGCATCCTCTTCCTGACGTGTCTCGCCGTTTTCCGCTATGTGGTGGTGAGCAAGCCTCTGAGGGCAGCGCAGGTGCAGCAAAAGTTTTGGGGTATAATTGCGTGTTCAGCCGTCTGGATCATCACCGCTGCCGAAATCACTCCTATGTTGACGATAATATCATTAGAGCAGCGCAACAACAAGACGTACTGCTTAGACTTTGCTAGCACCATAGACGTTAGTAACATGTTAAGTATGTGGTATGTCCGGCTGCTTACTGCCTTCGGATTTCTACTCCCTCTAGTGGTGGTATTCATGTGTTACATCGGTATAGTGAAACAGTTGGCCAAAGGGCCTTACACAACCAGCCCGTGTCGGATGCGAGCACGGCGCGTGACCGTGCTGATCCTGgtggtgtttgtgttgtgtttcctGCCGTATCACATCTTGCGTGTGTTGCGGATAGAAACTCGAAGGATGCCGTGCATGGTGGAGCACATAGTGCATGCAGCGTATATTATCTCCAGGCCTCTGGCTGGATTCAACACCTTTTTCAACCTGGCTCTGTACACTCTTTCAGGTGATAGGTTCAGGATGGCCTTCATCAGCACTTTTCACTGGGAACACTGTCTGACCAAGTTCAGGTTGCTGCTCCAAGCCGTCTTTAGAAAGGAACGCTGTGACATGCCGGCCACATGACTGGCAACTGTCCAACGCctgacttttctttctttcatctgTATTGGACATAATAtcgatacatttttttaattttttttaagtttaagttt

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08419 OXGR1, GPR99; oxoglutarate (alpha-ketoglutarate) receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793405.1 True 2506 mRNA 0.43 2 5051007 5054982

Neighbor

gene id symbol gene type direction distance location
LOC120554477 LOC103354588,LOC106960074,LOC106930318,LOC103147191,LOC103474384 coding upstream 145 5044021 ~ 5050862 (+)
LOC120554483 LOC104926398,LOC103354589,LOC104942249 coding upstream 52586 4995743 ~ 4998421 (+)
xirp2a xirp2,LOC103474301 coding upstream 206208 4796307 ~ 4844799 (+)
gca LOC104926393,LOC101070744,LOC103474249,LOC103354601 coding upstream 549908 4491643 ~ 4501099 (+)
LOC120554468 LOC103359857,LOC101070054,LOC100705556,LOC102305952 coding upstream 580468 4425664 ~ 4470539 (+)
dzip1 LOC102776338 coding downstream 39269 5094251 ~ 5108905 (+)
LOC120554463 abcc4,LOC102196569,LOC100702162,LOC102309803 coding downstream 79874 5134856 ~ 5166194 (+)
acp2 acp2 coding downstream 238185 5293167 ~ 5306737 (+)
txndc16 txndc16 coding downstream 265136 5320118 ~ 5335281 (+)
nid2a LOC103358232 coding downstream 328181 5383163 ~ 5428369 (+)
G232595 atp5b,LOC103392222 non-coding upstream 48340 5000445 ~ 5002667 (+)
LOC120554506 NA non-coding upstream 537048 4512612 ~ 4513959 (+)
G232453 NA non-coding upstream 538910 4511870 ~ 4512097 (+)
G232449 NA non-coding upstream 543074 4507482 ~ 4507933 (+)
LOC120554498 NA non-coding upstream 543546 4504352 ~ 4507461 (+)
LOC120554502 NA non-coding downstream 5817 5060799 ~ 5086125 (+)
G232670 NA non-coding downstream 61060 5116042 ~ 5116391 (+)
G232680 NA non-coding downstream 96001 5150983 ~ 5191290 (+)
LOC120554496 NA non-coding downstream 117407 5172389 ~ 5180268 (+)
G232683 NA non-coding downstream 117411 5172393 ~ 5630828 (+)
LOC120554464 LOC103354592,LOC107380990,LOC103389749,LOC106930317,LOC103147190,LOC106960073,LOC105020031,LOC106574546,LOC108438056,LOC106575308 other upstream 9125 5003321 ~ 5041882 (+)
LOC120554485 LOC103354594,LOC108245699,LOC106531295,LOC107086615 other upstream 101918 4848638 ~ 4949089 (+)
scn1lab NA other upstream 278012 4732462 ~ 4772995 (+)
G232425 NA other upstream 632905 4417164 ~ 4418102 (+)
dock9b LOC103359855 other upstream 651688 4340494 ~ 4399319 (+)
LOC120554524 nhlh2,LOC104936900,LOC103370041,LOC108245682,LOC101487065,LOC107087002 other downstream 433179 5488161 ~ 5498524 (+)
LOC120554525 vangl1,LOC102194868,LOC101486397,LOC102297404 other downstream 454106 5509088 ~ 5568201 (+)
fdx1 fdx1 other downstream 750053 5805035 ~ 5813194 (+)
LOC120554182 steap3,LOC103360323 other downstream 1386713 6441695 ~ 6453327 (+)
LOC120554601 mest other downstream 3567123 8622105 ~ 8628297 (+)

Expression


Co-expression Network