LOC120554566


Basic Information

Item Value
gene id LOC120554566
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 13706250 ~ 13711834 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793522.1
TCATGAATGGGACTGCTGGCTCCTGTACGGCAGAGATGCCGTATGGATACCAACCCCGTCTGAAAGGGCTTTACATTGCCACTGAGCTCATCATCGCAGTGCTAGCTATAATAGGCAACTTACTGGTTTGTCTGGCTGTCACCCGCAACAAAAAACTTCGCACTGTCACCAATTACTTCCTGgTATCATTGGCAGTGGCGGACATCCTGGTGGGCTTGGTGGCTATTCCCTGTGCAGTGCTGACAGACCTGGGTCAACCTCACCATAACCTGCCCCTCTGCCTGTTGCTGCTTAGCATCCTGATGGTGCTCACCCAGAGCTCCATCCTGAGTCTGTTAGCAGTAGCAGCGGAGCGTTACATGGCCATCCTTCTGCCCTTTCAATACCAGCGTGTCATGAGCCCCAGGAACGCCCAGCTGGCCCTGCTGGTCACGTGGGGCCTGGGAGCCATCTCCGGGTCTGTGCCACTTATGGACTGGAAAAGACAACCAGCAGGCTCTGACTACTGTATCTTCACTTGTGTGGTGGACATGAGCTACATGgtctacttcaacttcttctgcTGCCTCCTGGTGCCGCTGGTGGCCATGTTCATCATCTACGGCCACATCTTCCTCACTGTCCGCCACCAGCTTAGACGCATCGCTGTGGCCAGGGGAACCGCAGAGGACACAAGAGCAGCTGGTATAGGGAGCACTGGGACAGAAGACACTGGGAGTTCTGCTGCTGGGGGAACCGTAAGTGGTGTAGCAGACATGGGGACAGGAAAAGGAACCAGCAAACAAGCCAAGGAAAAGATGGGAAAATGTAAGGAAGTAGAGTCTGGCATTGGGTCTCTTATTGAAACAGAGACTACCGCTGTCTTTGCAAAGCCAGGTCTCCGGATTGCCTCAGCTGACTCTACCAGCTCCGGCTCTGCTCCTGGTGACCCCCAACCAGTAGCGTCCAACGAGGCCAAATCCAACCTTCGCACACGTCAGGAGGTGCATAAGGCCACCTCCCTCTTCCTGGTCCTGTTTCTCTTCATGGTGTGCTGGATGCCAATCCACCTCATTAACTGCGTCCTGCTGTTCTGCCCACAGTGTGAGGTGCCCATGTGGCTCACACTAGCAGCTATTTTGCTTTCCCACGCCAACTCGGCCCTCAACCCTATTCTGTATGCATACAGGATGAGGTCATTCCGATACACTCTCATAGGAATGTGGAGAGGAATGTGGAGTGTTAGGCCAAAACCCCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793522.1 True 1241 mRNA 0.54 4 13706250 13711834

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_27 NA coding downstream 594022 13112158 ~ 13112228 (-)
trnad-guc_30 NA coding downstream 649563 13056616 ~ 13056687 (-)
zgc:65895 tsc22d1,LOC106531085,LOC102196627,LOC106942021,LOC103477739,LOC103130603 coding downstream 657654 13021048 ~ 13048596 (-)
mtrf1 mtrf1,LOC104961503 coding downstream 710255 12992838 ~ 12995995 (-)
trnae-uuc_66 NA coding downstream 720362 12985817 ~ 12985888 (-)
hecw2b hecw2 coding upstream 85598 13797432 ~ 14008423 (-)
LOC120554288 NA coding upstream 268217 13980051 ~ 13981370 (-)
gtf3c3 gtf3c3 coding upstream 298431 14010265 ~ 14087482 (-)
LOC120554388 NA coding upstream 578839 14290673 ~ 14299690 (-)
slc19a2 slc19a2 coding upstream 644996 14356830 ~ 14399370 (-)
G234527 LOC104966508 non-coding downstream 201764 13498088 ~ 13504486 (-)
G234526 dmd non-coding downstream 208383 13486967 ~ 13497867 (-)
G234523 NA non-coding downstream 266439 13430981 ~ 13439811 (-)
G234491 NA non-coding downstream 500290 13202922 ~ 13205960 (-)
G234490 NA non-coding downstream 505956 13199978 ~ 13200294 (-)
G234586 NA non-coding upstream 98550 13810384 ~ 13813184 (-)
G234638 NA non-coding upstream 377173 14089007 ~ 14089210 (-)
G234641 NA non-coding upstream 379105 14090939 ~ 14091260 (-)
G234664 NA non-coding upstream 404021 14115855 ~ 14144870 (-)
LOC120554065 samd3,LOC101476819 non-coding upstream 417919 14129753 ~ 14131767 (-)
G234405 NA other downstream 752125 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 1413107 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 2167929 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 2216773 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 2264324 11388552 ~ 11441926 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 482478 14194312 ~ 14290043 (-)
G234898 NA other upstream 1136000 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 1254482 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 2536860 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 2614259 16326093 ~ 16352877 (-)

Expression


Co-expression Network