LOC120554575


Basic Information

Item Value
gene id LOC120554575
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 14601155 ~ 14614899 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793533.1
TTCTCTCTGCCACTTTCGTAATCCACTAATGTCTGAGGGACTAGAACCCGACTTCTCCAGTGATGAGGTGTTTAACAGCCGGTTTCCCATCCACCGCGCCTGTCGGGATGGAGATGTTGGAGCTTTGGTCTCACTGTTACAGCAGCTCTCAAACCAGGCTCATCTGACTGCTGAGGACTCGTGCTACGGATGGACCCCTATACACTGGGCTGCTCACTATGGGCAGTTGGAGTGTGTGGTGCGCCTGGTGCAGATGGGTTGTGAGGTGAACACAGTGACCAGCCGCTTCAaccagacacccacacacactgcagcGTTTGGAGGACATCCTCACTGTGTGGTCTGGCTGACTCAGGCTGGAGCCGACGTCAACATGCAGgattttgtaggtgaggCTCCCATCCACAAGGCGGCTCGTTCAGGTAGCTTGGAGTGTATCCAGGTCCTGTTGATAGCAGGTGCTAAGCCACATTTAAGGAATGCCAGTGGGCAGACAGCAGCGGACCTGGCCCACGCTCACGGCTTCCTCGACTGTTTCTGCCTCATCTCCAAAACCAAGAAGCACCTGCTGCAGCTCAGTGGACTCCATGGGAATGGAGTACAGAATGGAGACAGCGCCCCATGTGGTCAGGGCCTGCTCAGCAGAAAGAGGCTGCTGACCGCGGCGGACACTGGTCACATGAAGAAAGCCAGGGGAGCTGATACAGATGTTTTGGTACAGATGCAGGGCAGTGGAGGTGAGGAGCTGGAGAGCATGAACATGGAGTCTGCACAGGAGCTCAACTCAGcaGGTGACGACACCGAAGCCACCACCAATGGCCATTGTCACGCACTGCCTTATGCCGACCAGGATGGCCGCGAGCCCCCCAAAAGCATCTCCTCACCGCCTTCCGCTCCAGCCAATCAGCGGCCCGCAGCGGCAGCAGTGCCTGCTCAGCACGCTGACATGTGTGGCTCCCTGCATCTGAGCGGCAGTCCCAGCAGCTGTGTGTCCCATCGCCCGCCCCGGCGGGGGCTGATAGGAGCAGACTGCGGGGACTTCCTGCATTACGGACACTACCACGGCTTCGGAGACACCGCGGAGGAGCTGAGCGACAGCAGCTGCCTCGACTACAGCAGCAGCATCCGGGCCGAGCACAGATACAAGCAGGCCGTGGCCAGCACCATCCACCTCTACCACGACTCCTAAAGGACACGCGTCGCAGAGGATTGCCTTTCACAGCCAGCCTCCTGGAAACAGGGAAGCACTGCTCTTTTATATGCCTTCTCTTAACATTTGCATTAAAGAACAGTCTCACATTTTGGGGAATCATTAATTTGCTGCCAAACGCAGAGTCACTACTGCTACAGccatccaggacatgttgaacCTCGTTTGATGAAAATATTCCGAACTCAAAGTTCACTCGCTGGCCTTTTCAACTGCATCTCATGGTCTTCATCAGTGGATGGAGCTTGCTGGAGGAAGATCAGATCAGGAAGATCAGGACAGCATTCACATCTATAATCTTTGAACAGAGACAGGGCTTACGATCACACTCCCCACCCCATATTGGAAAGCCTATCTTCA
>XM_039793534.1
TTCTCTCTGCCACTTTCGTAATCCACTAATGTCTGAGGGACTAGAACCCGACTTCTCCAGTGATGAGGTGTTTAACAGCCGGTTTCCCATCCACCGCGCCTGTCGGGATGGAGATGTTGGAGCTTTGGTCTCACTGTTACAGCAGCTCTCAAACCAGGCTCATCTGACTGCTGAGGACTCGTGCTACGGATGGACCCCTATACACTGGGCTGCTCACTATGGGCAGTTGGAGTGTGTGGTGCGCCTGGTGCAGATGGGTTGTGAGGTGAACACAGTGACCAGCCGCTTCAaccagacacccacacacactgcagcGTTTGGAGGACATCCTCACTGTGTGGTCTGGCTGACTCAGGCTGGAGCCGACGTCAACATGCAGgattttgtaggtgaggCTCCCATCCACAAGGCGGCTCGTTCAGGTAGCTTGGAGTGTATCCAGGTCCTGTTGATAGCAGGTGCTAAGCCACATTTAAGGAATGCCAGTGGGCAGACAGCAGCGGACCTGGCCCACGCTCACGGCTTCCTCGACTGTTTCTGCCTCATCTCCAAAACCAAGAAGCACCTGCTGCAGCTCAGTGGACTCCATGGGAATGGAGTACAGAATGGAGACAGCGCCCCATGTGGTCAGGGCCTGCTCAGCAGAAAGAGGCTGCTGACCGCGGCGGACACTGGTCACATGAAGAAAGCCAGGGGAGCTGATAATGTTTTGGTACAGATGCAGGGCAGTGGAGGTGAGGAGCTGGAGAGCATGAACATGGAGTCTGCACAGGAGCTCAACTCAGcaGGTGACGACACCGAAGCCACCACCAATGGCCATTGTCACGCACTGCCTTATGCCGACCAGGATGGCCGCGAGCCCCCCAAAAGCATCTCCTCACCGCCTTCCGCTCCAGCCAATCAGCGGCCCGCAGCGGCAGCAGTGCCTGCTCAGCACGCTGACATGTGTGGCTCCCTGCATCTGAGCGGCAGTCCCAGCAGCTGTGTGTCCCATCGCCCGCCCCGGCGGGGGCTGATAGGAGCAGACTGCGGGGACTTCCTGCATTACGGACACTACCACGGCTTCGGAGACACCGCGGAGGAGCTGAGCGACAGCAGCTGCCTCGACTACAGCAGCAGCATCCGGGCCGAGCACAGATACAAGCAGGCCGTGGCCAGCACCATCCACCTCTACCACGACTCCTAAAGGACACGCGTCGCAGAGGATTGCCTTTCACAGCCAGCCTCCTGGAAACAGGGAAGCACTGCTCTTTTATATGCCTTCTCTTAACATTTGCATTAAAGAACAGTCTCACATTTTGGGGAATCATTAATTTGCTGCCAAACGCAGAGTCACTACTGCTACAGccatccaggacatgttgaacCTCGTTTGATGAAAATATTCCGAACTCAAAGTTCACTCGCTGGCCTTTTCAACTGCATCTCATGGTCTTCATCAGTGGATGGAGCTTGCTGGAGGAAGATCAGATCAGGAAGATCAGGACAGCATTCACATCTATAATCTTTGAACAGAGACAGGGCTTACGATCACACTCCCCACCCCATATTGGAAAGCCTATCTTCA
>XM_039793535.1
TTCTCTCTGCCACTTTCGTAATCCACTAATGTCTGAGGGACTAGAACCCGACTTCTCCAGTGATGAGGTGTTTAACAGCCGGTTTCCCATCCACCGCGCCTGTCGGGATGGAGATGTTGGAGCTTTGGTCTCACTGTTACAGCAGCTCTCAAACCAGGCTCATCTGACTGCTGAGGACTCGTGCTACGGATGGACCCCTATACACTGGGCTGCTCACTATGGGCAGTTGGAGTGTGTGGTGCGCCTGGTGCAGATGGGTTGTGAGGTGAACACAGTGACCAGCCGCTTCAaccagacacccacacacactgcagcGTTTGGAGGACATCCTCACTGTGTGGTCTGGCTGACTCAGGCTGGAGCCGACGTCAACATGCAGgattttgtaggtgaggCTCCCATCCACAAGGCGGCTCGTTCAGGTAGCTTGGAGTGTATCCAGGTCCTGTTGATAGCAGGTGCTAAGCCACATTTAAGGAATGCCAGTGGGCAGACAGCAGCGGACCTGGCCCACGCTCACGGCTTCCTCGACTGTTTCTGCCTCATCTCCAAAACCAAGAAGCACCTGCTGCAGCTCAGTGGACTCCATGGGAATGGAGTACAGAATGGAGACAGCGCCCCATGTGGTCAGGGCCTGCTCAGCAGAAAGAGGCTGCTGACCGCGGCGGACACTGGTCACATGAAGAAAGCCAGGGGAGCTGATACAGATGTTTTGGTACAGATGCAGGGCAGTGGAGGTGAGGAGCTGGAGAGCATGAACATGGAGTCTGCACAGGAGCTCAACTCAGGTGACGACACCGAAGCCACCACCAATGGCCATTGTCACGCACTGCCTTATGCCGACCAGGATGGCCGCGAGCCCCCCAAAAGCATCTCCTCACCGCCTTCCGCTCCAGCCAATCAGCGGCCCGCAGCGGCAGCAGTGCCTGCTCAGCACGCTGACATGTGTGGCTCCCTGCATCTGAGCGGCAGTCCCAGCAGCTGTGTGTCCCATCGCCCGCCCCGGCGGGGGCTGATAGGAGCAGACTGCGGGGACTTCCTGCATTACGGACACTACCACGGCTTCGGAGACACCGCGGAGGAGCTGAGCGACAGCAGCTGCCTCGACTACAGCAGCAGCATCCGGGCCGAGCACAGATACAAGCAGGCCGTGGCCAGCACCATCCACCTCTACCACGACTCCTAAAGGACACGCGTCGCAGAGGATTGCCTTTCACAGCCAGCCTCCTGGAAACAGGGAAGCACTGCTCTTTTATATGCCTTCTCTTAACATTTGCATTAAAGAACAGTCTCACATTTTGGGGAATCATTAATTTGCTGCCAAACGCAGAGTCACTACTGCTACAGccatccaggacatgttgaacCTCGTTTGATGAAAATATTCCGAACTCAAAGTTCACTCGCTGGCCTTTTCAACTGCATCTCATGGTCTTCATCAGTGGATGGAGCTTGCTGGAGGAAGATCAGATCAGGAAGATCAGGACAGCATTCACATCTATAATCTTTGAACAGAGACAGGGCTTACGATCACACTCCCCACCCCATATTGGAAAGCCTATCTTCA
>XM_039793536.1
TTCTCTCTGCCACTTTCGTAATCCACTAATGTCTGAGGGACTAGAACCCGACTTCTCCAGTGATGAGGTGTTTAACAGCCGGTTTCCCATCCACCGCGCCTGTCGGGATGGAGATGTTGGAGCTTTGGTCTCACTGTTACAGCAGCTCTCAAACCAGGCTCATCTGACTGCTGAGGACTCGTGCTACGGATGGACCCCTATACACTGGGCTGCTCACTATGGGCAGTTGGAGTGTGTGGTGCGCCTGGTGCAGATGGGTTGTGAGGTGAACACAGTGACCAGCCGCTTCAaccagacacccacacacactgcagcGTTTGGAGGACATCCTCACTGTGTGGTCTGGCTGACTCAGGCTGGAGCCGACGTCAACATGCAGgattttgtaggtgaggCTCCCATCCACAAGGCGGCTCGTTCAGGTAGCTTGGAGTGTATCCAGGTCCTGTTGATAGCAGGTGCTAAGCCACATTTAAGGAATGCCAGTGGGCAGACAGCAGCGGACCTGGCCCACGCTCACGGCTTCCTCGACTGTTTCTGCCTCATCTCCAAAACCAAGAAGCACCTGCTGCAGCTCAGTGGACTCCATGGGAATGGAGTACAGAATGGAGACAGCGCCCCATGTGGTCAGGGCCTGCTCAGCAGAAAGAGGCTGCTGACCGCGGCGGACACTGGTCACATGAAGAAAGCCAGGGGAGCTGATAATGTTTTGGTACAGATGCAGGGCAGTGGAGGTGAGGAGCTGGAGAGCATGAACATGGAGTCTGCACAGGAGCTCAACTCAGGTGACGACACCGAAGCCACCACCAATGGCCATTGTCACGCACTGCCTTATGCCGACCAGGATGGCCGCGAGCCCCCCAAAAGCATCTCCTCACCGCCTTCCGCTCCAGCCAATCAGCGGCCCGCAGCGGCAGCAGTGCCTGCTCAGCACGCTGACATGTGTGGCTCCCTGCATCTGAGCGGCAGTCCCAGCAGCTGTGTGTCCCATCGCCCGCCCCGGCGGGGGCTGATAGGAGCAGACTGCGGGGACTTCCTGCATTACGGACACTACCACGGCTTCGGAGACACCGCGGAGGAGCTGAGCGACAGCAGCTGCCTCGACTACAGCAGCAGCATCCGGGCCGAGCACAGATACAAGCAGGCCGTGGCCAGCACCATCCACCTCTACCACGACTCCTAAAGGACACGCGTCGCAGAGGATTGCCTTTCACAGCCAGCCTCCTGGAAACAGGGAAGCACTGCTCTTTTATATGCCTTCTCTTAACATTTGCATTAAAGAACAGTCTCACATTTTGGGGAATCATTAATTTGCTGCCAAACGCAGAGTCACTACTGCTACAGccatccaggacatgttgaacCTCGTTTGATGAAAATATTCCGAACTCAAAGTTCACTCGCTGGCCTTTTCAACTGCATCTCATGGTCTTCATCAGTGGATGGAGCTTGCTGGAGGAAGATCAGATCAGGAAGATCAGGACAGCATTCACATCTATAATCTTTGAACAGAGACAGGGCTTACGATCACACTCCCCACCCCATATTGGAAAGCCTATCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793533.1 True 1570 mRNA 0.56 6 14601155 14614899
XM_039793534.1 False 1567 mRNA 0.56 6 14601155 14614899
XM_039793535.1 False 1567 mRNA 0.56 6 14601155 14614899
XM_039793536.1 False 1564 mRNA 0.55 6 14601155 14614899

Neighbor

gene id symbol gene type direction distance location
LOC120554302 ube3a coding downstream 31245 14545740 ~ 14569910 (-)
LOC120554074 ddrgk1 coding downstream 155059 14434308 ~ 14446096 (-)
atg3 atg3 coding downstream 181164 14400865 ~ 14419991 (-)
slc19a2 slc19a2 coding downstream 201785 14356830 ~ 14399370 (-)
LOC120554388 NA coding downstream 301465 14290673 ~ 14299690 (-)
chrm4a LOC104937647,LOC103355860,LOC100699420 coding upstream 263659 14878558 ~ 14924344 (-)
gucy1b2 LOC103355875 coding upstream 320821 14935720 ~ 14963971 (-)
trnar-ccg_4 NA coding upstream 347462 14962361 ~ 14962433 (-)
LOC120553991 NA coding upstream 477305 15092204 ~ 15098640 (-)
LOC120554257 NA coding upstream 987416 15602315 ~ 15611660 (-)
G234828 NA non-coding downstream 869 14599136 ~ 14600286 (-)
G234802 NA non-coding downstream 58835 14537841 ~ 14542320 (-)
LOC120554079 NA non-coding downstream 117126 14477426 ~ 14484029 (-)
G234752 NA non-coding downstream 244755 14356095 ~ 14356400 (-)
G234736 NA non-coding downstream 303778 14297080 ~ 14297377 (-)
G234896 LOC103355859,LOC104964875 non-coding upstream 191733 14806632 ~ 14828409 (-)
G234927 NA non-coding upstream 472051 15086950 ~ 15087401 (-)
LOC120554280 NA non-coding upstream 574859 15189758 ~ 15190653 (-)
LOC120554270 NA non-coding upstream 693609 15308508 ~ 15309289 (-)
G235029 NA non-coding upstream 751509 15366408 ~ 15366892 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other downstream 311112 14194312 ~ 14290043 (-)
G234405 NA other downstream 1647030 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 2308012 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 3062834 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 3111678 11458937 ~ 11489477 (-)
G234898 NA other upstream 232935 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 351417 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 1633795 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 1711194 16326093 ~ 16352877 (-)
G235387 NA other upstream 1997084 16611983 ~ 16616316 (-)

Expression


Co-expression Network