fam207a


Basic Information

Item Value
gene id fam207a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20312524 ~ 20341903 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793633.1
TTCCGGTGGTTATTGTCGCTGACTTGACAGCAGGACACCACGCGCttttgacacatacacacacaaacacacacacaacgttactttgtttcactttactacAAATTTGCTATATATGCATTAGTCTGAGTTTAAAGGGTTTCAACATGGTGGGAAAGATAAAACATGTCCGACAGAAGCTTCACCAAGAGGCGGTGCGCCCCGGCTCCgggttagcattagcatcatCGCTAACGGAGCTGACGGCTGTTTCTGCTCCAATACTCCGGCAACAACAGCACAACAACAGGAGAGACACACAGGCTCCGGTGGAGAGCTGCTTCCCCTCGGGGATCTTCGCCGGCACAAAGATAACTCTGGACGCTCTGCGACAAAGTCTCCAGTGTGACGAAAAAGCTCCACATGTTCCCTCCGCTGCAGAGAAAGGTCCAGAAGAGAAGAAAGttaagacaaagaaagagaagatgaaggagaggagagacagatggCTCAACAAGATGAGCTCCATCAAACAGTTAAAGGAGCAGCAGTTGGCGGCGGTGCGGCGCCAGCAGACGCCCGTGGTTGGCGACATGCGGCCACTGGCCGACGCGCTGCCAGAACTCTGTCAGCTGATTGCCCCTGTCGCCGCCGGCAACACCCCCTCTGCTCGCCGCAAGAGCAGGAAGAACAGAGTACCGGTGAAGAGGCCGGAGCCCACAGACTTCAGTCAGATGAAACAGTCCCAGAAACGCAAACTCCTagaaaCGGAGAGCGTGCGGTTCGGCAGCGCCGTGAAGACACTCTCGGCCAAAATGAATCCTCTGGCAGATATCGGCGAGCAGCTGAGGAAGAAGATgagggaggaagaagagtacgctaacggctaacagctaacagggAAACATCTGGCGGTTTAAAGGAGGAAAGACTGTAAATGTTTCCTCTTCTGTAATAAACCACACAACATTTAACACTGA

Function

NR:

description
protein FAM207A-like isoform X2

GO:

id name namespace
GO:0043604 amide biosynthetic process biological_process
GO:0010467 gene expression biological_process
GO:0043170 macromolecule metabolic process biological_process

KEGG:

id description
ko03040 Spliceosome
ko03013 Nucleocytoplasmic transport
ko03015 mRNA surveillance pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793633.1 True 959 mRNA 0.52 6 20312524 20341903

Neighbor

gene id symbol gene type direction distance location
mxra5a NA coding upstream 41228 20258343 ~ 20271296 (+)
LOC120554034 NA coding upstream 277795 20029026 ~ 20034729 (+)
LOC120554605 pudp coding upstream 460570 19839605 ~ 19851954 (+)
LOC120554006 NA coding upstream 480316 19819866 ~ 19832208 (+)
LOC120554574 NA coding upstream 494041 19816765 ~ 19818483 (+)
gyg2 NA coding downstream 67109 20409012 ~ 20419118 (+)
LOC120554612 rcan1,LOC103389732 coding downstream 118071 20459974 ~ 20480326 (+)
LOC120554008 NA coding downstream 351057 20692960 ~ 20694611 (+)
LOC120554009 NA coding downstream 364489 20706392 ~ 20707535 (+)
ebpl NA coding downstream 546066 20887969 ~ 20889752 (+)
G236258 NA non-coding upstream 13884 20298376 ~ 20298640 (+)
LOC120554047 NA non-coding upstream 27626 20283156 ~ 20284898 (+)
G236199 NA non-coding upstream 104588 20207730 ~ 20207936 (+)
G236196 NA non-coding upstream 126644 20185653 ~ 20185880 (+)
G236189 NA non-coding upstream 217645 20094348 ~ 20094879 (+)
G236268 NA non-coding downstream 36522 20378425 ~ 20380497 (+)
G236304 NA non-coding downstream 169771 20511674 ~ 20511988 (+)
G236312 NA non-coding downstream 215989 20557892 ~ 20558095 (+)
G236313 NA non-coding downstream 216352 20558255 ~ 20558599 (+)
LOC120554584 NA non-coding downstream 319474 20661377 ~ 20662785 (+)
prkx prkx other upstream 77672 20208329 ~ 20234852 (+)
G236162 NA other upstream 314857 19996799 ~ 19997667 (+)
nlgn4xa nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 other upstream 325795 19897092 ~ 19986729 (+)
anos1a LOC103358938 other upstream 613629 19671872 ~ 19698895 (+)
G235778 NA other upstream 2130712 18176825 ~ 18181812 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other downstream 13399 20355302 ~ 20377740 (+)
cd99 NA other downstream 41415 20383318 ~ 20406326 (+)
LOC120554724 plcd4,LOC103363317 other downstream 145764 20487667 ~ 20511076 (+)
LOC120554627 runx1,LOC104961881 other downstream 253192 20595095 ~ 20635922 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other downstream 427573 20769476 ~ 20841778 (+)

Expression


Co-expression Network