LOC120554641 (LOC103473932)


Basic Information

Item Value
gene id LOC120554641
gene name LOC103473932
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21126894 ~ 21149363 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793658.1
GAGAGAAACCAGGAGAAGTCTTCCGTCTGTCCGAGCCGGATAGTACGAAGCTTTACCTGACAAGtTGAAGCTTGCTGATTGGTCCCCTGACTTCAGCCTGGCGGAGTTCGTGCCATCGTGGGGTGCCACAGTAATTTCCGGATCGCCTTCAACGTGAACATGATCGGCACCAAGGAGCAGGCGCACCGCATCGCGCTGGACCTACAGGAGCAGGGCTgcgtggaaaaaaaacacagCCTGGGCATCTGCAGAAGGTGCAGGGGATGGGCTGAGGACGAGTCCAACATGGCCCAGGTGTCCACCAACATCCCCCCTCCACACAGTGCACCAGGAGATCTGCAGCGTCgcacaggaTCTGAAGCTGCCGGTTGTGGGCTCTCTGATCGTGGGTCTGATTCCTCTGAAACCCGTCGTAGACTCGGCCGACTTCTTCATCCAGACAGATGGGCTCTTCATTCTGGAAGAGGAGCACAAAGTCCGCCTGGTTGTGTCGCAGTTAGTTTCCGCCATCTGAAGCTCCAGCTGAAGGGACAAAAGATGAAGACGCCTAAAGAAGTCATCTTGGGAATTTTAGACGACTTGGTAGCTGAGGACTTTGAAAAATTCAAGTGGCACCTGCAGGGAGTCCTTGAAGACTTCCCAGCAATCCCAAAGAGTAAACTGGAGAATGTAAACAGGGTGAAGACAGTGGACCTGATGTTCTCGGCCTACTGTATAAACACTATTAAAGTGACCAGAATAGTTTTAGTGAAGATTTATCAAAATGAGCTAGTGAAGAATTTATCAAACATCATCTATGAACCTACAGAGATTCTTGCTGCGTGCCAGCGAAAAGTCAAATCCAACTTACATCAGACATTCCAGCGTGTGTCTGAGGGGATTGCTAAATCAGGAAACAAGACCgttctgaatcagatgttcacagagatccaCATCACAGAGGGAGGGGTCAatgatgaacatgaggtcacacagattgaaacagcatcctGGAAACCAGACACACCAGAACCAACAATCAGACAAGACGACATCTTTAAAACTccacctggaagagatgaaccaatcagaacagtgattACAAAGGGAGGGGCTGGCattgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatccatTTCATTTTTcctttcaccttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatCAGTTCTTTAATGAAATCAGAAtagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcgtgactgatgttacagagtccacctcagtgggtgtgctgctgacaaacctcatcagagggaatctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctaattgtgttgacatggtgacagaggtcagagggttcactgacccacaaaaggaggagtacttcaggaggagattcagagatgaggagcaggccagAAGAATCATCTCCCATGTCAAGAGATCACGAAGCCTCCATATCATGTGCCAcgtcccagtcttctgctggatcactgctacagttctggaggacgtgttgaagacgagagagggaggagagctggCCAAGACcttgactgagatgtacatctaCTTCCTGATGGTTCAGTCCGAAGTGAAGAACATCAAGTATGCTGGAGGAGCTGAGGCAGATTCACCCTGGAGTCCAGAGAACAGGAAGATGATCAAGTCTttgggaaaactggcttttgacgggctgcagaaaggcaaactgatcttctatgaatcagacgTGACAGAATGTGGCATCGACATCACAGCTGCCTCCGTGTACTCAGGcgtgttcacacagatctttaaagaggagagaggagagtcCCAGAACGTGTTCAGCTTTGTCCATCTGAGttttcaggagtttctggctgctcttcatgtacatctgacattcatcaactctggagtcaacTTGCTGTCAGGAAAACAAACATCCTCCCAAACAACCTCCCAGCTGCCTAAAGTCTTCagagaaaaactaaaacatctCCACCAGAGTGCTGTAgacaaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttctcTAGAGTCCAATGAGAAACACCTACGAGGTCTgttgacacagacaggaagtagctcacagacaaacaagaaaacagtcaagtacatcaagaagaagatcagtgagaatcagtctgcagagagaagcatcaatctgtttcactgtctgaatgaactgaatgatcgaTCTCTAGTGCAGGAGATCCAAAACTGCCTGAGATCAGGACATCTCTCCACAaataaactgtctcctgctcagtggtcagctgtGGTTTTCATCTTACTCTCATCAGAAGAAgatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtgttCAAAActtccaacaaagctctcctgagtggctgtaacctgtcagagagaagctgtaaAGCTCTGTCCTCAATTCTCAGCTctgagtcctctagtctgagagagctagacctgagtaacaacaacctgcaggattcaggagtgaggctgatctctgttggactgaagagtccagaCTGCAcactggaaactctcagACTGAGTGTCTGTAACCTGTcaaagagaagctgtgaagctttgtcctcagttctcagctccaagtcctctagtctgagagagctggacctgagtaacaacaacctgaaggattcaggagggaagctgatctctgttggactgaagagtccagaCTGCACACTGAAGACTCTCAGGCTGAGTGTCTGTAAGATGTCAGAGaaaagctgtgaagctctgtcttcagttctcagctccaagtcgtctagtctgagagagctggacctaagtaacaacaacctgaaggattcaggagggaagcgACTGGCGGCTGGACTTCAGAATCTACACTGtaaactggagactctcagGTTGAGTgcctgtaacctgtcagagaaaAGCTGTAAAGTTCTGTCTTCAGTtttcagctcccagtcctctagccTGAGAGAgatggacctgagtaacaacaacctgcaggattcaggagggaagctgctGTTGGCTGGACTTCAGAGTCAACACTGtaaactggagactctcagGCTGAGTGTCTGtaatctgtcagagagaagctgtgaagttCTGTCcgcagttctcagctcccagtcctctagtctgagagagctggatctgagtaacaacaacctgcaggattcaggaggaaAGCTGATCTCtcttggactgaagagtccacactgcacactggataTTCTCAGtctgtcaggctgtctgatctcagaagaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcagaAGTGAAGCTCCTGTCAGCAGGACTGAAGGATCCTCTCTGGAaactggaaactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaagaagtattcctgtgaactcacatttgacacaaacacagtgaacagacaCCTAAAACTGTCTGagaacaacaggaaggtgaaaCATGTGGAGGAGTATCAGTCGTATCCTAAAAATCCAGAAAGGTTTGACTgtcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggaggggtttCTATAGCAGTgggttacagaggaatcagcaggagaggagacagtggtgactgtgtgtttggatataatgatcagtcctggagtctgatctGCTCTGGTGGTGGTTACTCTGTTAGTCACAATAACAGAGaaacatccatctcctcctctgtctctgatagagtagcagtgtatgtggactgtccagctggctctctgtccttctacacagtctcctctgactcactgagccacctctacaccttcaacaccacattcactgaaCCTCTTTATCCTGGGTTTGGGTTTGGGTATAAGTCATATGGTtgctcagtgtctctgtgtcctgtgtagGACGGAGAGTCTCCTCCTTTCAGAGAACCAGACAATTGGGTCTAATCAGGACCATCAGCTGATGTTAGTGAGAAGAATGTGGGTGTCACCAATGATTTCCTGAATGGATTAGATTCTGCTCCAaacagctaaatgacatgtaatgctATTCGTCATTGTCTCCAAAAGCAGCATTCAGCAACGACCTTGCtgcttatctgacagctttagttcctTTTCACATTCAGATTATTACAACTAAATACAGTCAGATAATAAATCAGAGAATAAATCACTAAACCTCTTTGAGGCTCTTTATatgatatttttatttcttttcagattattaaaactaaatacaatcagatcataaatgatgatgtattaTTACAGATTACTAGTTGCAACATTAAAGTAATCAGTCATTAGAAACCAGTAATAATATACTGATTATTCTGCAGAATCaccacttttacttttggtacctTAAGTATTTTTATGctgatacttttgtacttttacttatttctacactgtggtatcaGTACTTTAACTTGAGTACTTTGTGGTTTGTGTTTTATTATgatataatgtttttattttgttattataattcTAAGAGTCAGTCAGTTTTGTCGTCAGTTAACCTTCGTACAGATCTGTTCCGCTCATATCCACGTTTGTTTTCTCCCCTGAGTGATTCTGATTGGCGGGCGGtattaaaatggaaaaaagacTTTGCTGTTGGACGTTTTGGGGCAAAACCTGAATGTtaagtgcatgtaaacgtagtcagtgactCTTAAGCTGTTTTCCAACAGTCTCCTGAGTTCATCTCTTCACGTACCGATGCTGTTGCGTGGCTTTGTGCGTTGTCCGTAGGCCGCTGACTCTTCATGCTCCGACGCCTCTTTCCACATGATAATCCAACAGTTGTCTTTTCCTCGTGAGCAATCCAAATTTCCACAAAGTCCATCAACAAGAATCTCCACTTCAAGGGAGGGTTTTTTACTTGTGTAGTGGCGTTTTCTCCCCAGATTgaacaaaaccaaacaaaaaacttAAAGTCAAACAGCCACTGAGGCACCAAAGGAGTGAATCTTATGCAGGTCAGAAACGTTCATTGTCCAGGCaaatttttgcattttgtgacggcgtcaccgttcttagtaGATCCGGTAGAGCGTGGtgtgcggagagagagagaggtgcgctcagaAAAGATAGAACATTTAGAGAACGTCAACCccattaacattccctgatgggtttctttatgaaagatatagattttaagCGGAGGGAATTATGTTTCTTCGTCAGCTTCTTGaaccgtgtgttgccaatgcgacATATCGATGACACTATGTTAACAAGAATCTTGTGTGATGGCTAGTTGACTTTTTAACAGATAGATCTCAGATGTTGAGGGTAAATGGtgttttatcttatctttaaCCACTTTTATGTTACTTCTAatgcagcacggtggctcagtggttagcacttctgcctcacagcaaaaaggttctgggtttgaatccagTTTGTTCCGGGCctgtctgtgtggagtttgcatgttttcCCCGTGTTTGcttgggtttc
>XM_039793659.1
TAAAAGTCAAAGTAAATCTCTCCAGTTAGTTCACTTTGTCCCGTGCTGAGATGCAGATGTTTCTCCATGTTCAACTTTTGGTTGTGTCGCAGTTAGTTTCCGCCATCTGAAGCTCCAGCTGAAGGGACAAAAGATGAAGACGCCTAAAGAAGTCATCTTGGGAATTTTAGACGACTTGGTAGCTGAGGACTTTGAAAAATTCAAGTGGCACCTGCAGGGAGTCCTTGAAGACTTCCCAGCAATCCCAAAGAGTAAACTGGAGAATGTAAACAGGGTGAAGACAGTGGACCTGATGTTCTCGGCCTACTGTATAAACACTATTAAAGTGACCAGAATAGTTTTAGTGAAGATTTATCAAAATGAGCTAGTGAAGAATTTATCAAACATCATCTATGAACCTACAGAGATTCTTGCTGCGTGCCAGCGAAAAGTCAAATCCAACTTACATCAGACATTCCAGCGTGTGTCTGAGGGGATTGCTAAATCAGGAAACAAGACCgttctgaatcagatgttcacagagatccaCATCACAGAGGGAGGGGTCAatgatgaacatgaggtcacacagattgaaacagcatcctGGAAACCAGACACACCAGAACCAACAATCAGACAAGACGACATCTTTAAAACTccacctggaagagatgaaccaatcagaacagtgattACAAAGGGAGGGGCTGGCattgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagccaaccaggacatccatTTCATTTTTcctttcaccttcagagagctgaatgtgctgaaagagaaaaagtacagcttggtggaacttgttcatCAGTTCTTTAATGAAATCAGAAtagcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcctctggacttcctcaacactgagatcgtgactgatgttacagagtccacctcagtgggtgtgctgctgacaaacctcatcagagggaatctgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcctaattgtgttgacatggtgacagaggtcagagggttcactgacccacaaaaggaggagtacttcaggaggagattcagagatgaggagcaggccagAAGAATCATCTCCCATGTCAAGAGATCACGAAGCCTCCATATCATGTGCCAcgtcccagtcttctgctggatcactgctacagttctggaggacgtgttgaagacgagagagggaggagagctggCCAAGACcttgactgagatgtacatctaCTTCCTGATGGTTCAGTCCGAAGTGAAGAACATCAAGTATGCTGGAGGAGCTGAGGCAGATTCACCCTGGAGTCCAGAGAACAGGAAGATGATCAAGTCTttgggaaaactggcttttgacgggctgcagaaaggcaaactgatcttctatgaatcagacgTGACAGAATGTGGCATCGACATCACAGCTGCCTCCGTGTACTCAGGcgtgttcacacagatctttaaagaggagagaggagagtcCCAGAACGTGTTCAGCTTTGTCCATCTGAGttttcaggagtttctggctgctcttcatgtacatctgacattcatcaactctggagtcaacTTGCTGTCAGGAAAACAAACATCCTCCCAAACAACCTCCCAGCTGCCTAAAGTCTTCagagaaaaactaaaacatctCCACCAGAGTGCTGTAgacaaggccttacagagtccaaatggacacctggacttgttcctccgcttcctcctgggtctttctcTAGAGTCCAATGAGAAACACCTACGAGGTCTgttgacacagacaggaagtagctcacagacaaacaagaaaacagtcaagtacatcaagaagaagatcagtgagaatcagtctgcagagagaagcatcaatctgtttcactgtctgaatgaactgaatgatcgaTCTCTAGTGCAGGAGATCCAAAACTGCCTGAGATCAGGACATCTCTCCACAaataaactgtctcctgctcagtggtcagctgtGGTTTTCATCTTACTCTCATCAGAAGAAgatctggacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgaggctgctgccagtgttCAAAActtccaacaaagctctcctgagtggctgtaacctgtcagagagaagctgtaaAGCTCTGTCCTCAATTCTCAGCTctgagtcctctagtctgagagagctagacctgagtaacaacaacctgcaggattcaggagtgaggctgatctctgttggactgaagagtccagaCTGCAcactggaaactctcagACTGAGTGTCTGTAACCTGTcaaagagaagctgtgaagctttgtcctcagttctcagctccaagtcctctagtctgagagagctggacctgagtaacaacaacctgaaggattcaggagggaagctgatctctgttggactgaagagtccagaCTGCACACTGAAGACTCTCAGGCTGAGTGTCTGTAAGATGTCAGAGaaaagctgtgaagctctgtcttcagttctcagctccaagtcgtctagtctgagagagctggacctaagtaacaacaacctgaaggattcaggagggaagcgACTGGCGGCTGGACTTCAGAATCTACACTGtaaactggagactctcagGTTGAGTgcctgtaacctgtcagagaaaAGCTGTAAAGTTCTGTCTTCAGTtttcagctcccagtcctctagccTGAGAGAgatggacctgagtaacaacaacctgcaggattcaggagggaagctgctGTTGGCTGGACTTCAGAGTCAACACTGtaaactggagactctcagGCTGAGTGTCTGtaatctgtcagagagaagctgtgaagttCTGTCcgcagttctcagctcccagtcctctagtctgagagagctggatctgagtaacaacaacctgcaggattcaggaggaaAGCTGATCTCtcttggactgaagagtccacactgcacactggataTTCTCAGtctgtcaggctgtctgatctcagaagaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcatccaggagactcagaAGTGAAGCTCCTGTCAGCAGGACTGAAGGATCCTCTCTGGAaactggaaactctcagggtggagcctgctggagtcagatggttgacaccaggtctgaagaagtattcctgtgaactcacatttgacacaaacacagtgaacagacaCCTAAAACTGTCTGagaacaacaggaaggtgaaaCATGTGGAGGAGTATCAGTCGTATCCTAAAAATCCAGAAAGGTTTGACTgtcctcagctgctgtgtagagatggtctgactggtcgctgttactgggaggttgagaggagaggaggggtttCTATAGCAGTgggttacagaggaatcagcaggagaggagacagtggtgactgtgtgtttggatataatgatcagtcctggagtctgatctGCTCTGGTGGTGGTTACTCTGTTAGTCACAATAACAGAGaaacatccatctcctcctctgtctctgatagagtagcagtgtatgtggactgtccagctggctctctgtccttctacacagtctcctctgactcactgagccacctctacaccttcaacaccacattcactgaaCCTCTTTATCCTGGGTTTGGGTTTGGGTATAAGTCATATGGTtgctcagtgtctctgtgtcctgtgtagGACGGAGAGTCTCCTCCTTTCAGAGAACCAGACAATTGGGTCTAATCAGGACCATCAGCTGATGTTAGTGAGAAGAATGTGGGTGTCACCAATGATTTCCTGAATGGATTAGATTCTGCTCCAaacagctaaatgacatgtaatgctATTCGTCATTGTCTCCAAAAGCAGCATTCAGCAACGACCTTGCtgcttatctgacagctttagttcctTTTCACATTCAGATTATTACAACTAAATACAGTCAGATAATAAATCAGAGAATAAATCACTAAACCTCTTTGAGGCTCTTTATatgatatttttatttcttttcagattattaaaactaaatacaatcagatcataaatgatgatgtattaTTACAGATTACTAGTTGCAACATTAAAGTAATCAGTCATTAGAAACCAGTAATAATATACTGATTATTCTGCAGAATCaccacttttacttttggtacctTAAGTATTTTTATGctgatacttttgtacttttacttatttctacactgtggtatcaGTACTTTAACTTGAGTACTTTGTGGTTTGTGTTTTATTATgatataatgtttttattttgttattataattcTAAGAGTCAGTCAGTTTTGTCGTCAGTTAACCTTCGTACAGATCTGTTCCGCTCATATCCACGTTTGTTTTCTCCCCTGAGTGATTCTGATTGGCGGGCGGtattaaaatggaaaaaagacTTTGCTGTTGGACGTTTTGGGGCAAAACCTGAATGTtaagtgcatgtaaacgtagtcagtgactCTTAAGCTGTTTTCCAACAGTCTCCTGAGTTCATCTCTTCACGTACCGATGCTGTTGCGTGGCTTTGTGCGTTGTCCGTAGGCCGCTGACTCTTCATGCTCCGACGCCTCTTTCCACATGATAATCCAACAGTTGTCTTTTCCTCGTGAGCAATCCAAATTTCCACAAAGTCCATCAACAAGAATCTCCACTTCAAGGGAGGGTTTTTTACTTGTGTAGTGGCGTTTTCTCCCCAGATTgaacaaaaccaaacaaaaaacttAAAGTCAAACAGCCACTGAGGCACCAAAGGAGTGAATCTTATGCAGGTCAGAAACGTTCATTGTCCAGGCaaatttttgcattttgtgacggcgtcaccgttcttagtaGATCCGGTAGAGCGTGGtgtgcggagagagagagaggtgcgctcagaAAAGATAGAACATTTAGAGAACGTCAACCccattaacattccctgatgggtttctttatgaaagatatagattttaagCGGAGGGAATTATGTTTCTTCGTCAGCTTCTTGaaccgtgtgttgccaatgcgacATATCGATGACACTATGTTAACAAGAATCTTGTGTGATGGCTAGTTGACTTTTTAACAGATAGATCTCAGATGTTGAGGGTAAATGGtgttttatcttatctttaaCCACTTTTATGTTACTTCTAatgcagcacggtggctcagtggttagcacttctgcctcacagcaaaaaggttctgggtttgaatccagTTTGTTCCGGGCctgtctgtgtggagtttgcatgttttcCCCGTGTTTGcttgggtttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793658.1 True 5808 mRNA 0.46 15 21126894 21149363
XM_039793659.1 False 5404 mRNA 0.45 12 21126894 21145155

Neighbor

gene id symbol gene type direction distance location
dytn NA coding downstream 51639 20965938 ~ 21075255 (-)
ftcd ftcd coding downstream 123625 20990890 ~ 21003269 (-)
vps16 vps16 coding downstream 259094 20853565 ~ 20867800 (-)
LOC120554361 NA coding downstream 324624 20794346 ~ 20802270 (-)
LOC120554635 LOC104961873,LOC103363323 coding downstream 670831 20442981 ~ 20456063 (-)
LOC120554016 NA coding upstream 502603 21651966 ~ 21691088 (-)
LOC120554648 NA coding upstream 551342 21700705 ~ 21725016 (-)
G236572 NA non-coding downstream 49098 21069316 ~ 21077796 (-)
G236673 NA non-coding downstream 74821 21051507 ~ 21052073 (-)
G236662 NA non-coding downstream 96632 21029937 ~ 21030262 (-)
G236659 NA non-coding downstream 137094 20988518 ~ 20989800 (-)
G236624 NA non-coding downstream 138420 20958314 ~ 20988474 (-)
LOC120554677 NA non-coding upstream 20432 21169795 ~ 21183925 (-)
LOC120554675 NA non-coding upstream 42356 21191719 ~ 21199247 (-)
G236692 NA non-coding upstream 44229 21193592 ~ 21247076 (-)
G236693 NA non-coding upstream 44634 21193997 ~ 21213372 (-)
G236695 NA non-coding upstream 68354 21217717 ~ 21234618 (-)
arl11 NA other downstream 175029 20940988 ~ 20951865 (-)
LOC120554644 NA other downstream 206396 20892914 ~ 20920498 (-)
G236646 NA other downstream 263583 20862680 ~ 20863311 (-)
rgn LOC103371141 other downstream 273511 20843492 ~ 20853383 (-)
G236349 NA other downstream 365902 20760708 ~ 20760992 (-)
LOC120554013 LOC103366577 other upstream 51633 21200996 ~ 21242177 (-)
LOC120554014 NA other upstream 150918 21300281 ~ 21557021 (-)
LOC120554015 NA other upstream 485485 21634848 ~ 21651918 (-)
G236611 NA other upstream 524329 21673692 ~ 21674838 (-)

Expression


Co-expression Network