cdk15 (cdk15,LOC100710713)


Basic Information

Item Value
gene id cdk15
gene name cdk15,LOC100710713
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21372615 ~ 21392410 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793682.1
GTCATGAGACGCTGTCTGCTCATCCTCAAACATGTGAGtcttatgagagagagagaaagagagaggaggaaggagaagatggaggacGTGTCCTGCTGGCTGAGGAGCTGCTGTAGCTGCTGCTGTggtgaagaagaggaagatgaagaggaggagaaagaggggaaGGGAGGAGTAGAAGAAGAGATGAAGATGGAGGAGCCGCGCTTCAGAAAGAGCCGGAGTTCAACTTCTCTCCAGCCGGCCGACGAGcagGATCCTGACCGGTCCCCCCCGGGTCCCCAGCCTCACTGGTTCCACACGCTGCAGGTCCGACGCTTCAGAGTCCAGCGAGGACGCAGCAACAGTGACCCGCTGGGAGGACCCACAGCCCAGGAGACCTTCACCTGGAAACCGGGCCTGGAGTTCGGAGCGGCTCATTCCTACCTGAGTCTGGAGAAACTGGGAGAAGGAGCGTACGCCTCGGTCTACAAAGGAATCAGCaggatcAATGGTCAGCTGGTAGCTCTGAAGGTGATCCGTATGAAGACTGAGGAGGGAATCCCTTTCACCGCCATCAGAGAAGcATCTCTCCTCAAAGGTCTGAAACACGCCAACATCGTGGTCCTCCATGACATCATCCACACCCGAGAGTCCCTGACCTTCGTCTTCGAATACGTGCAGACAGACCTGGCCCAGTACCTGAGTGAACACCCGGGAGGACTACACTCACACAACGTCAGGctgtTCCAGTTCCAGCTGCTGAGAGCTCTGAGCTTCATCCACAGCCGCCGGATCCTCCACCGAGACCTGAAGCCCCAAAACCTGCTGATCAGCTACCTGGGGGAACTCAAGATGGCCGACTTCGgtCTGGCTCGGTCCAAGTCCATCCCGAGCCAGAGCTTCTCCTCCGAGGTGGTGACGCTGTGGTACCGCCCCCCCGACGTCCTGCTGGGATCCACAGACTACTCTACAGCTCTGGACATCTGGGGGGCCGGCTGTATCCTGGTGGAGATGCTCCAGGGAGCGCCGGCGTTCCCCGGAGACTCGGACGTCTTCCAACAACTACACAAGATCTGGACCGTTCTGGGTGTCCCGTCTGAGGACAGCTGGCCGGGAGTCTCCCAGCTGCCCAACTACAGACCAGAGCTGTTCCTCCACTCAGAGCCCAAGCAGTTCAGGAGCGTCTGGAAAAGGCTGGAGCAGCTGCCCTATAAGACGGAGGATCTGGTCCAGAGGATGCTGACGGTCGTCCCCGGCGACCGTATCTCAGCGCAGGCGGCCCTGCAGCATCCGTACTTCAGCACGCTGCCGACTCCCATCATGCACctgagagacaCCGTGTCCATCTTCAAGGTGCCCGGCGTGCGTCTGGAGACGGAGGTCAGAGACACCTTCAACCCCGGGCGCAGAGTCAGACCCTCGCTGTTGCCTGGCAACGCCAAGTTCTGGTGAAGAGACGCTAGCAGACGGCTAGCAGACAGGAACAAGCCCTCGGATAGACACACGGGCAGAGTGGACACTTACAGCATGTCTGAGTGGATTTGAACGCACCATAAGTAGACTTTCTGCAtcctctaaacacacacatgcgcacacaaaTGCACGTACGCACACGAGCATGATGCGCGCACAtccatagacacacacacagacacacagacacacacacacacagagagacatatacacacacacacagagacacgcaca
>XM_039793683.1
TCATGAGACGCTGTCTGCTCATCCTCAAACATGTGAGtcttatgagagagagagaaagagagaggaggaaggagaagatggaggacGTGTCCTGCTGGCTGAGGAGCTGCTGTAGCTGCTGCTGTggtgaagaagaggaagatgaagaggaggagaaagaggggaaGGGAGGAGTAGAAGAAGAGATGAAGATGGAGGAGCCGCGCTTCAGAAAGAGCCGGAGTTCAACTTCTCTCCAGCCGGCCGACGAGGATCCTGACCGGTCCCCCCCGGGTCCCCAGCCTCACTGGTTCCACACGCTGCAGGTCCGACGCTTCAGAGTCCAGCGAGGACGCAGCAACAGTGACCCGCTGGGAGGACCCACAGCCCAGGAGACCTTCACCTGGAAACCGGGCCTGGAGTTCGGAGCGGCTCATTCCTACCTGAGTCTGGAGAAACTGGGAGAAGGAGCGTACGCCTCGGTCTACAAAGGAATCAGCaggatcAATGGTCAGCTGGTAGCTCTGAAGGTGATCCGTATGAAGACTGAGGAGGGAATCCCTTTCACCGCCATCAGAGAAGcATCTCTCCTCAAAGGTCTGAAACACGCCAACATCGTGGTCCTCCATGACATCATCCACACCCGAGAGTCCCTGACCTTCGTCTTCGAATACGTGCAGACAGACCTGGCCCAGTACCTGAGTGAACACCCGGGAGGACTACACTCACACAACGTCAGGctgtTCCAGTTCCAGCTGCTGAGAGCTCTGAGCTTCATCCACAGCCGCCGGATCCTCCACCGAGACCTGAAGCCCCAAAACCTGCTGATCAGCTACCTGGGGGAACTCAAGATGGCCGACTTCGgtCTGGCTCGGTCCAAGTCCATCCCGAGCCAGAGCTTCTCCTCCGAGGTGGTGACGCTGTGGTACCGCCCCCCCGACGTCCTGCTGGGATCCACAGACTACTCTACAGCTCTGGACATCTGGGGGGCCGGCTGTATCCTGGTGGAGATGCTCCAGGGAGCGCCGGCGTTCCCCGGAGACTCGGACGTCTTCCAACAACTACACAAGATCTGGACCGTTCTGGGTGTCCCGTCTGAGGACAGCTGGCCGGGAGTCTCCCAGCTGCCCAACTACAGACCAGAGCTGTTCCTCCACTCAGAGCCCAAGCAGTTCAGGAGCGTCTGGAAAAGGCTGGAGCAGCTGCCCTATAAGACGGAGGATCTGGTCCAGAGGATGCTGACGGTCGTCCCCGGCGACCGTATCTCAGCGCAGGCGGCCCTGCAGCATCCGTACTTCAGCACGCTGCCGACTCCCATCATGCACctgagagacaCCGTGTCCATCTTCAAGGTGCCCGGCGTGCGTCTGGAGACGGAGGTCAGAGACACCTTCAACCCCGGGCGCAGAGTCAGACCCTCGCTGTTGCCTGGCAACGCCAAGTTCTGGTGAAGAGACGCTAGCAGACGGCTAGCAGACAGGAACAAGCCCTCGGATAGACACACGGGCAGAGTGGACACTTACAGCATGTCTGAGTGGATTTGAACGCACCATAAGTAGACTTTCTGCAtcctctaaacacacacatgcgcacacaaaTGCACGTACGCACACGAGCATGATGCGCGCACAtccatagacacacacacagacacacagacacacacacacacagagagacatatacacacacacacagagacacgcaca

Function

symbol description
cdk15 Predicted to enable cyclin binding activity and cyclin-dependent protein serine/threonine kinase activity. Predicted to be involved in protein phosphorylation and regulation of transcription involved in G1/S transition of mitotic cell cycle. Predicted to act upstream of or within phosphorylation. Predicted to be active in cytosol and nucleus. Orthologous to human CDK15 (cyclin dependent kinase 15).

NR:

description
PREDICTED: cyclin-dependent kinase 15 isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K15594 CDK15, PFTK2; cyclin-dependent kinase 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793682.1 True 1692 mRNA 0.58 13 21372615 21392410
XM_039793683.1 False 1688 mRNA 0.58 13 21372616 21392410

Neighbor

gene id symbol gene type direction distance location
dph3 dph3,LOC107559917,LOC105022091,LOC107660145 coding upstream 711 21367445 ~ 21371904 (+)
LOC120554662 NA coding upstream 80392 21289363 ~ 21292223 (+)
LOC120554666 NA coding upstream 181170 21165803 ~ 21191445 (+)
LOC120554012 NA coding upstream 207061 21157961 ~ 21165554 (+)
LOC120554651 NA coding upstream 251845 21098583 ~ 21120770 (+)
LOC120554659 NA coding downstream 211082 21603492 ~ 21605036 (+)
LOC120554665 NA coding downstream 219509 21611919 ~ 21612646 (+)
G236441 NA non-coding upstream 27447 21246564 ~ 21345168 (+)
G236455 NA non-coding upstream 42132 21296177 ~ 21330483 (+)
G236446 NA non-coding upstream 125491 21193603 ~ 21247124 (+)
G236440 NA non-coding upstream 138642 21152413 ~ 21233973 (+)
G236448 NA non-coding upstream 148922 21197425 ~ 21223693 (+)
G236501 NA non-coding downstream 37770 21430180 ~ 21617586 (+)
G236506 NA non-coding downstream 93444 21485854 ~ 21525535 (+)
G236507 NA non-coding downstream 97884 21490294 ~ 21491732 (+)
G236479 NA non-coding downstream 100700 21493110 ~ 21809546 (+)
G236508 NA non-coding downstream 116078 21508488 ~ 21822018 (+)
G236467 NA other upstream 11380 21302326 ~ 21361235 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other upstream 294819 20976072 ~ 21077796 (+)
zdbf2 NA other upstream 408030 20956949 ~ 20964585 (+)
G236394 NA other upstream 455838 20912655 ~ 20916777 (+)
cavin2b NA other upstream 485246 20845648 ~ 20887369 (+)
G236461 LOC102792843 other downstream 15517 21407927 ~ 21422915 (+)
G236459 LOC103360213,LOC106936810,LOC103477369,LOC103473932,LOC106933094,LOC107835021,LOC108249964,LOC107380983,LOC108250351,LOC108242155,LOC108250349,LOC108229490 other downstream 31875 21424285 ~ 21634001 (+)
G236530 NA other downstream 230088 21622498 ~ 21623439 (+)
G236466 NA other downstream 233528 21625938 ~ 21633849 (+)

Expression


Co-expression Network