ccdc14


Basic Information

Item Value
gene id ccdc14
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 14589062 ~ 14598938 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793716.1
tgtagaaataataataaaaaaaaagccgaCAACACGCTTTAAACCCATCAGCTATCGTCAGTATATAGCTAGCTAAAATAGTCAAAACAGTCTCCTCTGTGTTTGGCAGCACATAAATCAGTAGTAGCGTTAGTTTACTGAAGCTGCTGTGTTTCACCATGAAAGGAACTGCTAAAAGcaagGTGGTGACATCCGGGAGGCTGACAGGAGGAGTCAAAGGGCAGCTGGCCAGGAGACGAGTGACTCCAAAACCAGGACCAGCAGCCTGCCCTGAGCCAGCCTACTCTCTGTACTCCACAGACTCTGAAGACCAGGTTACTTCTCTCCATAAGGGTCTAGACCGGTGTGCTGCCTTGCTCGGTGGCATCCTTCAGGCTGAGAAGACGGcttTGCCAGGCCTTCCCAAAGCAGTGAAGTGTGGAGCAGCTAAATCAAGACCATCTACCTCACGAATAAAGAAAACCATCAAGAATACAGACCAGAAGAGCTGTCAGTCAAGCAGCACAGCTCCAAGAACAACTCCTCCGTCTGCTGTCCCAGCTGCACACTCGCAAGGGAAGCTCCATCCAGCTCAGAAACACCCTCCCACCCTGCTGCAGTCTCACGTCCCTTCTTCACCCAGCCAAACACTGCAGCATCACCCTGCCACCAACCCTCCCCCCAAGCCCCAGACCTCCATCTCTCCACCCCAGCCCAACCCTCCCCCTCAGACTGACTGCCAGGCTGCTTCTGAAGCTCCACGCCCACGTTGCCAGGCCGAGCGCGATAGAGAAGAGGAGTTTGTTCCTGTGAGAGACATCAATGCCCAAAGCACTGCCGCGGACCCACACGCAGCCGTCGGACACACACCCTCGCACGTAAACACCTGTACCTTGAAGATGTCAAACATGCAGCTAGAGCTCGGAAAAGTTAATAACGTCCCTCAGGACCCACACAGCGGGGAGGACTGCAGCGCAGAGAAAGAAGGGAAATTGAAGACCGTTCAGTATCTGCTTGCAGAACTCAAGGCTCTGATCTCCGGACAAGGCAGTGTAGCAGAGAGGCTGCTCAGTCATCTGGAGCAGACGGTGTCTTCACCACTGATGAATGCTGGTGGGTCGAGCATCCCGACTGCACCAGACCTATCATCACTACACAGCCAGAACACTCAGCTCCGCAGACGTGTGAGGATTCTTAACCAGCAGTtaaaggagaaggagaaagctGAGAGGCAACAGAATATGGATACACTCTTTAACTCAGAAGAGTTGACTTTGCAGGAGGATCTCACGACCGCTCAGTCCCGAATGCAGGAGCTCCAGGATGACCTCGCGGAACTACGGAAAGCCCTTCAGGACACACAGAGccagctgacagacagagaagcaCATAATGCAGTCATCAAAACAGacttgGAGGCCACTAGAAGCAGGTTGCTGGACAGTGAGCGAGAGAAGAGGGAGTTGGCTTCACTTGCCCAGCAAAGACTGGAAGAGATAGGAAACCTTAaaagGATTCTTCAGAATCAGGAGTCATTAAATTGTCCTACAGCTGTTGACAGCTCAGTCTTAGACACTGTGCcaacaaaacaacatttcaaCCCACACCAGAACAGACAGGATCCAGTAGAGCCCCCCACTGACCGCATCACCCAGTTCCTGATGtctctggatcagctggagccAACACACACTGAGCACGCGTGCGCGGCCGCAGAGAGCGAAGGAAACGCACTGGAGCAGAAGAAACTGAACTCAGTCCGGCTGAGAGACACTTTATCACATCCCGAGGTCCGATCTCAGCAAGGGGACAAACCCGAAGACTCGGCCCGTCACCAAAACTCTCATCTTGACCAATCCCGTTGTTTAGATGAAGGCCAGTCGTGCGGGTGGCGGCTGGAGAAGAAGCGCAGACGCGTGTTGAACGCCACGCTGTCCCAGTGCGATGTGGAATCCGTGTGGTCCGACTGGAGCACGAGGTCAGGGTCGACCTTTGACACCAGAGACGAGGCAGCGTTCAGGGACGGCCTGGCAGCTCTGGACGCCAGCATAGCCAGTCTGCAGAAGACTATTCAACTGGATCTGGGGAAGTGATTCACACTCAGCTTtgcttatattatatattgtaatTCATACCCTCTTTTGTATTCTgcattttgcctttttttgtgaTGATTTTaacaagtggtatttcagataggaaataaagcatttaaaaaataaa
>XM_039793717.1
tgtagaaataataataaaaaaaaagccgaCAACACGCTTTAAACCCATCAGCTATCGTCAGTATATAGCTAGCTAAAATAGTCAAAACAGTCTCCTCTGTGTTTGGCAGCACATAAATCAGTAGTAGCGTTAGTTTACTGAAGCTGCTGTGTTTCACCATGAAAGGAACTGCTAAAAGcaagGTGGTGACATCCGGGAGGCTGACAGGAGGAGTCAAAGGGCAGCTGGCCAGGAGACGAGTGACTCCAAAACCAGGACCAGCAGCCTGCCCTGAGCCAGCCTACTCTCTGTACTCCACAGACTCTGAAGACCAGGTTACTTCTCTCCATAAGGGTCTAGACCGGTGTGCTGCCTTGCTCGGTGGCATCCTTCAGGCTGAGAAGACGGGCCTTCCCAAAGCAGTGAAGTGTGGAGCAGCTAAATCAAGACCATCTACCTCACGAATAAAGAAAACCATCAAGAATACAGACCAGAAGAGCTGTCAGTCAAGCAGCACAGCTCCAAGAACAACTCCTCCGTCTGCTGTCCCAGCTGCACACTCGCAAGGGAAGCTCCATCCAGCTCAGAAACACCCTCCCACCCTGCTGCAGTCTCACGTCCCTTCTTCACCCAGCCAAACACTGCAGCATCACCCTGCCACCAACCCTCCCCCCAAGCCCCAGACCTCCATCTCTCCACCCCAGCCCAACCCTCCCCCTCAGACTGACTGCCAGGCTGCTTCTGAAGCTCCACGCCCACGTTGCCAGGCCGAGCGCGATAGAGAAGAGGAGTTTGTTCCTGTGAGAGACATCAATGCCCAAAGCACTGCCGCGGACCCACACGCAGCCGTCGGACACACACCCTCGCACGTAAACACCTGTACCTTGAAGATGTCAAACATGCAGCTAGAGCTCGGAAAAGTTAATAACGTCCCTCAGGACCCACACAGCGGGGAGGACTGCAGCGCAGAGAAAGAAGGGAAATTGAAGACCGTTCAGTATCTGCTTGCAGAACTCAAGGCTCTGATCTCCGGACAAGGCAGTGTAGCAGAGAGGCTGCTCAGTCATCTGGAGCAGACGGTGTCTTCACCACTGATGAATGCTGGTGGGTCGAGCATCCCGACTGCACCAGACCTATCATCACTACACAGCCAGAACACTCAGCTCCGCAGACGTGTGAGGATTCTTAACCAGCAGTtaaaggagaaggagaaagctGAGAGGCAACAGAATATGGATACACTCTTTAACTCAGAAGAGTTGACTTTGCAGGAGGATCTCACGACCGCTCAGTCCCGAATGCAGGAGCTCCAGGATGACCTCGCGGAACTACGGAAAGCCCTTCAGGACACACAGAGccagctgacagacagagaagcaCATAATGCAGTCATCAAAACAGacttgGAGGCCACTAGAAGCAGGTTGCTGGACAGTGAGCGAGAGAAGAGGGAGTTGGCTTCACTTGCCCAGCAAAGACTGGAAGAGATAGGAAACCTTAaaagGATTCTTCAGAATCAGGAGTCATTAAATTGTCCTACAGCTGTTGACAGCTCAGTCTTAGACACTGTGCcaacaaaacaacatttcaaCCCACACCAGAACAGACAGGATCCAGTAGAGCCCCCCACTGACCGCATCACCCAGTTCCTGATGtctctggatcagctggagccAACACACACTGAGCACGCGTGCGCGGCCGCAGAGAGCGAAGGAAACGCACTGGAGCAGAAGAAACTGAACTCAGTCCGGCTGAGAGACACTTTATCACATCCCGAGGTCCGATCTCAGCAAGGGGACAAACCCGAAGACTCGGCCCGTCACCAAAACTCTCATCTTGACCAATCCCGTTGTTTAGATGAAGGCCAGTCGTGCGGGTGGCGGCTGGAGAAGAAGCGCAGACGCGTGTTGAACGCCACGCTGTCCCAGTGCGATGTGGAATCCGTGTGGTCCGACTGGAGCACGAGGTCAGGGTCGACCTTTGACACCAGAGACGAGGCAGCGTTCAGGGACGGCCTGGCAGCTCTGGACGCCAGCATAGCCAGTCTGCAGAAGACTATTCAACTGGATCTGGGGAAGTGATTCACACTCAGCTTtgcttatattatatattgtaatTCATACCCTCTTTTGTATTCTgcattttgcctttttttgtgaTGATTTTaacaagtggtatttcagataggaaataaagcatttaaaaaataaat

Function

NR:

description
PREDICTED: coiled-coil domain-containing protein 14 isoform X1

GO:

id name namespace
GO:0090304 nucleic acid metabolic process biological_process
GO:0044451 obsolete nucleoplasm part cellular_component

KEGG:

id description
ko03420 Nucleotide excision repair

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793716.1 True 2202 mRNA 0.52 11 14589062 14598937
XM_039793717.1 False 2194 mRNA 0.52 11 14589062 14598938

Neighbor

gene id symbol gene type direction distance location
ddx4 NA coding upstream 2319 14571126 ~ 14586743 (+)
LOC120554303 LOC107101608,LOC103355870,LOC103477065,LOC106935410,LOC107832892,LOC106932269 coding upstream 44444 14531790 ~ 14544618 (+)
atp1b1b LOC104936446,LOC103355854,LOC103389586 coding upstream 80650 14499284 ~ 14508412 (+)
LOC120554078 LOC105905688,LOC102213723,LOC102296852 coding upstream 102819 14484168 ~ 14486243 (+)
cars2 cars2 coding upstream 154446 14420009 ~ 14434616 (+)
LOC120554576 hsf2bp coding downstream 16119 14615057 ~ 14636819 (+)
cryaa cryaa,LOC104954342 coding downstream 42775 14641713 ~ 14645495 (+)
LOC120554076 NA coding downstream 52204 14651142 ~ 14794465 (+)
LOC120554245 NA coding downstream 462186 15061124 ~ 15070384 (+)
LOC120553992 hps3 coding downstream 685564 15284502 ~ 15285185 (+)
G234777 NA non-coding upstream 115379 14473448 ~ 14473683 (+)
LOC120554077 NA non-coding upstream 127311 14448891 ~ 14461751 (+)
G234763 NA non-coding upstream 142800 14438958 ~ 14446262 (+)
G234721 NA non-coding upstream 232384 14356076 ~ 14356678 (+)
G234720 NA non-coding upstream 235412 14353419 ~ 14353650 (+)
G234838 NA non-coding downstream 46664 14645602 ~ 14646219 (+)
G234841 NA non-coding downstream 49186 14648124 ~ 14649049 (+)
G234869 NA non-coding downstream 267367 14866305 ~ 14887613 (+)
G234895 NA non-coding downstream 404691 15003629 ~ 15013712 (+)
G234908 NA non-coding downstream 421294 15020232 ~ 15020564 (+)
G234651 NA other upstream 444192 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 1386250 13169370 ~ 13202812 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other upstream 1563542 13002963 ~ 13025520 (+)
LOC120554049 ect2l other upstream 1791408 12786641 ~ 12797654 (+)
LOC120554058 obsl1,LOC102777652 other upstream 2219841 12358027 ~ 12369221 (+)
LOC120554715 LOC103355859,LOC104964875 other downstream 207589 14806527 ~ 14910075 (+)
LOC120554227 NA other downstream 429900 15028838 ~ 15042444 (+)
LOC120554234 NA other downstream 1789759 16388697 ~ 16612671 (+)
trnat-cgu_20 NA other downstream 2157627 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 2161420 16760358 ~ 16760430 (+)

Expression


Co-expression Network