abi2b (abi2)


Basic Information

Item Value
gene id abi2b
gene name abi2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18113995 ~ 18143453 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793723.1
CCAGAGAGccctcccccacacacatacacatacacacacacacgccgctcCGCTAAAGATGTGAAAATGGCGGAGCTACAAATGCTTTTGGAAGAGGAGATTCCAGCAGGGCGAAGCGCACTACTAGACAGCTTCACCAATTTGGAAAGAGTCGCGGAGTACTGCGAAAGCAACTATGTCCAGtctCCAGACAAGCAGAGGGCCCTGGAGGAGACCAAGAACTACACCACCCAGTCTCTGGCCAGCGTCGCCTACCTGATCAACACGCTGGCCAACAATGTCCTCCAGATGCTGGACATCCAGGCCTCGCAGCTCCGCCGCATGGAGTCCTCCATCAACCACATCTCACAGACGGTGGACATCCACAAAGAGAAGGTGGCCCGGCGGGAGATCGGCATCCTCACCACCAACAAGAACACGTCCCGCACGCACAAGATCATCGCCCCAGCCAATCCCGAGAGGCCTGTGCGCTACATCCGCAAGCCCATCGACTACAGCATGCTAGACGACATGGGCCACGGAGTCAAGGCCAGCGCTCAAAACATGAAGGCCGGAGGCGGCGGACTCCCTCGCACAAACCCCCCCACACAGAAGCCCCCCAGCCCGCCCATGTCGGGGAAAGGGACCCTTGGcAGCGGGAGCAGCGGAGGCAGCCATCCCAGCAGCAGTCGCAGCAGCAGCCGAGAGAACAGTGGCAGTGGCAGCGTGGGCGTGCCCATCGCCGTGCCGACCCCAGCCCCGCCCACCGCCTTCCCAGGCGCTCCTCAGTTCTACAGCATGAACCGCCCGGCGCAGCCACCCCAGAACTCGCAGGTGGGAGGCTCGCTGCCGTATCGCCGACCCGCGTCCGTCACCGGTCAGCCCAACATGGCCCACAACCAAAGCCAGCTCAACGGGGGACCACACTTCGCCCAGAACCCAGCCGGCCCGCTCGCGCCCCCGCCCCCCTCCATGCAGATCACCCCTCAGCTGCCTCTGATGGGCTTTGTGGCCCGAGTTCAGGAGACTATCTCAGACGTGCCGCCTCCACCTCCGCCCGCCGAGGAGCCGGTGTTTGAGGAacccacacctcctcctccgccGCCGGAGGACTACGAGGACGACGAGGACGAGGAAGAGTCGGCCGTGGTGGAGTACAGTGACCCGTACGCCGAGGAGGACCCGCCCTGGGCCCCGCGCACCTACATGGAGAAAGTGGTGGCCATCTACGACTACGCCCGCGACAAGGAAGACGAGCTCTCGTTCCAGGAGGGCGCCATCATCTACGTCATCAAGAAGAACGACGACGGCTGGTACGAGGGCGTGATGAACGGCACCACGGGCCTGTTCCCCGGCAACTACGTCGAGTCAATCATGCACTACGCCGACTGAacaacccccccgcccccctgccccctccctctctcagcGGCGGAGGAGTAAAGGGAGGAGCGTTAGACGGGGGGagtggagggggagggggagccGTGGGTTTAAAGGTCAAAGACTTTGATCAGACAGAGCATGATCACCTCCGGGCGAAGAGAGAAccgggagggaggaggaggagg
>XM_039793724.1
CCAGAGAGccctcccccacacacatacacatacacacacacacgccgctcCGCTAAAGATGTGAAAATGGCGGAGCTACAAATGCTTTTGGAAGAGGAGATTCCAGCAGGGCGAAGCGCACTACTAGACAGCTTCACCAATTTGGAAAGAGTCGCGGAGTACTGCGAAAGCAACTATGTCCAGtctCCAGACAAGCAGAGGGCCCTGGAGGAGACCAAGAACTACACCACCCAGTCTCTGGCCAGCGTCGCCTACCTGATCAACACGCTGGCCAACAATGTCCTCCAGATGCTGGACATCCAGGCCTCGCAGCTCCGCCGCATGGAGTCCTCCATCAACCACATCTCACAGACGGTGGACATCCACAAAGAGAAGGTGGCCCGGCGGGAGATCGGCATCCTCACCACCAACAAGAACACGTCCCGCACGCACAAGATCATCGCCCCAGCCAATCCCGAGAGGCCTGTGCGCTACATCCGCAAGCCCATCGACTACAGCATGCTAGACGACATGGGCCACGGAGTCAAGTGGTTGCAAAGGTTTAAGGCCAGCGCTCAAAACATGAAGGCCGGAGGCGGCGGACTCCCTCGCACAAACCCCCCCACACAGAAGCCCCCCAGCCCGCCCATGTCGGGGAAAGGGACCCTTGGcAGCGGGAGCAGCGGAGGCAGCCATCCCAGCAGCAGTCGCAGCAGCAGCCGAGAGAACAGTGGCAGTGGCAGCGTGGGCGTGCCCATCGCCGTGCCGACCCCAGCCCCGCCCACCGCCTTCCCAGGCGCTCCTCAGTTCTACAGCATGAACCGCCCGGCGCAGCCACCCCAGAACTCGCAGGTGGGAGGCTCGCTGCCGTATCGCCGACCCGCGTCCGTCACCGGTCAGCCCAACATGGCCCACAACCAAAGCCAGCTCAACGGGGGACCACACTTCGCCCAGAACCCAGTCTCAGACGTGCCGCCTCCACCTCCGCCCGCCGAGGAGCCGGTGTTTGAGGAacccacacctcctcctccgccGCCGGAGGACTACGAGGACGACGAGGACGAGGAAGAGTCGGCCGTGGTGGAGTACAGTGACCCGTACGCCGAGGAGGACCCGCCCTGGGCCCCGCGCACCTACATGGAGAAAGTGGTGGCCATCTACGACTACGCCCGCGACAAGGAAGACGAGCTCTCGTTCCAGGAGGGCGCCATCATCTACGTCATCAAGAAGAACGACGACGGCTGGTACGAGGGCGTGATGAACGGCACCACGGGCCTGTTCCCCGGCAACTACGTCGAGTCAATCATGCACTACGCCGACTGAacaacccccccgcccccctgccccctccctctctcagcGGCGGAGGAGTAAAGGGAGGAGCGTTAGACGGGGGGagtggagggggagggggagccGTGGGTTTAAAGGTCAAAGACTTTGATCAGACAGAGCATGATCACCTCCGGGCGAAGAGAGAAccgggagggaggaggaggagga
>XM_039793725.1
CCAGAGAGccctcccccacacacatacacatacacacacacacgccgctcCGCTAAAGATGTGAAAATGGCGGAGCTACAAATGCTTTTGGAAGAGGAGATTCCAGCAGGGCGAAGCGCACTACTAGACAGCTTCACCAATTTGGAAAGAGTCGCGGAGTACTGCGAAAGCAACTATGTCCAGtctCCAGACAAGCAGAGGGCCCTGGAGGAGACCAAGAACTACACCACCCAGTCTCTGGCCAGCGTCGCCTACCTGATCAACACGCTGGCCAACAATGTCCTCCAGATGCTGGACATCCAGGCCTCGCAGCTCCGCCGCATGGAGTCCTCCATCAACCACATCTCACAGACGGTGGACATCCACAAAGAGAAGGTGGCCCGGCGGGAGATCGGCATCCTCACCACCAACAAGAACACGTCCCGCACGCACAAGATCATCGCCCCAGCCAATCCCGAGAGGCCTGTGCGCTACATCCGCAAGCCCATCGACTACAGCATGCTAGACGACATGGGCCACGGAGTCAAGGCCAGCGCTCAAAACATGAAGGCCGGAGGCGGCGGACTCCCTCGCACAAACCCCCCCACACAGAAGCCCCCCAGCCCGCCCATGTCGGGGAAAGGGACCCTTGGcAGCGGGAGCAGCGGAGGCAGCCATCCCAGCAGCAGTCGCAGCAGCAGCCGAGAGAACAGTGGCAGTGGCAGCGTGGGCGTGCCCATCGCCGTGCCGACCCCAGCCCCGCCCACCGCCTTCCCAGGCGCTCCTCAGTTCTACAGCATGAACCGCCCGGCGCAGCCACCCCAGAACTCGCAGGTGGGAGGCTCGCTGCCGTATCGCCGACCCGCGTCCGTCACCGGTCAGCCCAACATGGCCCACAACCAAAGCCAGCTCAACGGGGGACCACACTTCGCCCAGAACCCAGTCTCAGACGTGCCGCCTCCACCTCCGCCCGCCGAGGAGCCGGTGTTTGAGGAacccacacctcctcctccgccGCCGGAGGACTACGAGGACGACGAGGACGAGGAAGAGTCGGCCGTGGTGGAGTACAGTGACCCGTACGCCGAGGAGGACCCGCCCTGGGCCCCGCGCACCTACATGGAGAAAGTGGTGGCCATCTACGACTACGCCCGCGACAAGGAAGACGAGCTCTCGTTCCAGGAGGGCGCCATCATCTACGTCATCAAGAAGAACGACGACGGCTGGTACGAGGGCGTGATGAACGGCACCACGGGCCTGTTCCCCGGCAACTACGTCGAGTCAATCATGCACTACGCCGACTGAacaacccccccgcccccctgccccctccctctctcagcGGCGGAGGAGTAAAGGGAGGAGCGTTAGACGGGGGGagtggagggggagggggagccGTGGGTTTAAAGGTCAAAGACTTTGATCAGACAGAGCATGATCACCTCCGGGCGAAGAGAGAAccgggagggaggaggaggagg
>XM_039793726.1
CGCCAGAGAGccctcccccacacacatacacatacacacacacacgccgctcCGCTAAAGATGTGAAAATGGCGGAGCTACAAATGCTTTTGGAAGAGGAGATTCCAGCAGGGCGAAGCGCACTACTAGACAGCTTCACCAATTTGGAAAGAGTCGCGGAGTACTGCGAAAGCAACTATGTCCAGtctCCAGACAAGCAGAGGGCCCTGGAGGAGACCAAGAACTACACCACCCAGTCTCTGGCCAGCGTCGCCTACCTGATCAACACGCTGGCCAACAATGTCCTCCAGATGCTGGACATCCAGGCCTCGCAGCTCCGCCGCATGGAGTCCTCCATCAACCACATCTCACAGACGGTGGACATCCACAAAGAGAAGGTGGCCCGGCGGGAGATCGGCATCCTCACCACCAACAAGAACACGTCCCGCACGCACAAGATCATCGCCCCAGCCAATCCCGAGAGGCCTGTGCGCTACATCCGCAAGCCCATCGACTACAGCATGCTAGACGACATGGGCCACGGAGTCAAGTGGTTGCAAAGGTTTAAGGCCAGCGCTCAAAACATGAAGGCCGGAGGCGGCGGACTCCCTCGCACAAACCCCCCCACACAGAAGCCCCCCAGCCCGCCCATGTCGGGGAAAGGGACCCTTGGcAGCGGGAGCAGCGGAGGCAGCCATCCCAGCAGCAGTCGCAGCAGCAGCCGAGAGAACAGTGGCAGTGGCAGCGTGGGCGTGCCCATCGCCGTGCCGACCCCAGCCCCGCCCACCGCCTTCCCAGGCGCTCCTCAGTTCTACAGCATGAACCGCCCGGCGCAGCCACCCCAGAACTCGCAGGTGGGAGGCTCGCTGCCGTATCGCCGACCCGCGTCCGTCACCGGTCAGCCCAACATGGCCCACAACCAAAGCCAGCTCAACGGGGGACCACACTTCGCCCAGAACCCAGCCGGCCCGCTCGCGCCCCCGCCCCCCTCCATGCAGATCACCCCTCAGCTGCCTCTGATGGGCTTTGTGGCCCGAGTTCAGGAGACTATCTCAGACGTGCCGCCTCCACCTCCGCCCGCCGAGGAGCCGGTGTTTGAGGAacccacacctcctcctccgccGCCGGAGGACTACGAGGACGACGAGGACGAGGAAGAGTCGGCCGTGGTGGAGTACAGTGACCCGTACGCCGAGGAGGACCCGCCCTGGGCCCCGCGCACCTACATGGAGAAAGTGGTGGCCATCTACGACTACGCCCGCGACAAGGAAGACGAGCTCTCGTTCCAGGAGGGCGCCATCATCTACGTCATCAAGAAGAACGACGACGGCTGGTACGAGGGCGTGATGAACGGCACCACGGGCCTGTTCCCCGGCAACTACGTCGAGTCAATCATGCACTACGCCGACTGAacaacccccccgcccccctgccccctccctctctcagcGGCGGAGGAGTAAAGGGAGGAGCGTTAGACGGGGGGagtggagggggagggggagccGTGGGTTTAAAGGTCAAAGACTTTGATCAGACAGAGCATGATCACCTCCGGGCGAAGAGAGAAccgggagggaggaggaggagga

Function

symbol description
abi2 Enables several functions, including SH3 domain binding activity; identical protein binding activity; and ubiquitin protein ligase binding activity. Contributes to small GTPase binding activity. Involved in Rac protein signal transduction; positive regulation of cellular component biogenesis; and zonula adherens assembly. Acts upstream of or within peptidyl-tyrosine phosphorylation. Located in several cellular components, including filopodium tip; lamellipodium; and nucleoplasm. Part of SCAR complex. Is active in adherens junction. Colocalizes with actin filament.

NR:

description
PREDICTED: abl interactor 2 isoform X15

GO:

id name namespace
GO:0008154 actin polymerization or depolymerization biological_process
GO:0061098 positive regulation of protein tyrosine kinase activity biological_process
GO:0005737 cytoplasm cellular_component
GO:0030296 protein tyrosine kinase activator activity molecular_function

KEGG:

id description
K05751 ABI2; abl interactor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793723.1 False 1550 mRNA 0.63 9 18113996 18143451
XM_039793724.1 False 1482 mRNA 0.63 9 18113995 18143451
XM_039793725.1 False 1463 mRNA 0.63 8 18113996 18143451
XM_039793726.1 True 1571 mRNA 0.63 10 18113995 18143453

Neighbor

gene id symbol gene type direction distance location
LOC120554632 LOC103360035,LOC103370267 coding downstream 11964 18029836 ~ 18102031 (-)
LOC120554265 NA coding downstream 140818 17971201 ~ 17973177 (-)
LOC120554266 NA coding downstream 144592 17967966 ~ 17969403 (-)
LOC120554256 NA coding downstream 146186 17966724 ~ 17967809 (-)
LOC120554000 LOC100690921,LOC103360025 coding downstream 236107 17862318 ~ 17877888 (-)
LOC120554721 LOC104966233,LOC100698939 coding upstream 524 18143977 ~ 18158300 (-)
LOC120554723 NA coding upstream 16363 18159816 ~ 18176708 (-)
LOC120554053 mpp4 coding upstream 34117 18177570 ~ 18186577 (-)
LOC120554369 LOC104960229 coding upstream 119383 18262836 ~ 18269669 (-)
LOC120554384 NA coding upstream 185055 18328508 ~ 18340419 (-)
G235793 NA non-coding downstream 38 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 127817 17985922 ~ 17986178 (-)
G235725 NA non-coding downstream 170498 17943210 ~ 17943497 (-)
G235724 NA non-coding downstream 173668 17934775 ~ 17940327 (-)
G235723 NA non-coding downstream 183010 17930532 ~ 17930985 (-)
G235816 NA non-coding upstream 67050 18210503 ~ 18214168 (-)
G235844 NA non-coding upstream 109371 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding upstream 113490 18256943 ~ 18257506 (-)
G235908 NA non-coding upstream 389994 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 453546 18596999 ~ 18597208 (-)
s100b LOC103360204,LOC104927403 other downstream 368738 17734731 ~ 17745257 (-)
G235350 NA other downstream 1010478 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1357930 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1371707 16736186 ~ 16742288 (-)
G235387 NA other downstream 1497679 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 127625 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 260773 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1380051 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1587866 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2223888 20367341 ~ 20368433 (-)

Expression


Co-expression Network