LOC120554721 (LOC104966233,LOC100698939)


Basic Information

Item Value
gene id LOC120554721
gene name LOC104966233,LOC100698939
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18143977 ~ 18158300 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793727.1
CTATTAATTCTACAGGGTAAATTTCATATCCATAAAGCGAAATTTTCAAACACTGTATAACATGTTtgtaaagttaaaataaataaaatgcaaataattaaaaataataattaaaaaaaatttaaaaaaagatcttCTGGTCCATTCTCCATACCGGTGGGTGGCGGTAATGGACCAAATCGTTGTTTCCCAACCGTCATGAAAacctgaaagaaaaagaagcgCTCCAGACCATGTTGTCGAGCACAGAGCAATCGTTCCTGCTCACTTTCTTGTTGACGTGGTGGCGGTGGCTTGTTATCGGTTCGGGTGGAAATCTCTACATATTCATGAAGCGAACTTAGCAGAAATAGTGCTAATAAAAGCGAGAAGTCATGCTGGACTTTGCCATCTTTGCTGTCACGTTTGTCATCATTTTGGTCGGCGCTGTTCTCTATTTGTACCCGTCATCCAGAAGGGCCTCCGGTATCCCAGGTCTCAATCCTACAGATGAGAAGGATGGGAACCTGCAGGACATCGTGAACAAAGGCAGTCTGCATGAGTTCCTGGTCAGTCTGCATCAGCAGTTTGGTTCGGTGGCGTCATTCTGGTTCGGCGGTCGGCCCGTGGTCAGCCTGGGCTCCGTGCACCAGCTACGGCAGCACATCAACCCCAACCACACCACTGACTCCTTCGAGACGATGCTGAAgtcgttgctaggttaccagtcGGGAACGGGAGGCGGGGCCACCGAGACCATAATAAGGAAAAAGGTGTACGAAAGTGGCATCAACAACACGTTGAAGAACAACTTCCCGCTTGTGCTCAAGCTGTCGGAGGAGCTCGTAGGAAAGTGGAAGGCGTTCCCGGACTCCCAGCACACCCCTCTGTGTGCCCACCTGCTGGGTCTGGCCATGAAGACGGTCACCCAGCTGGCTCTGGGCGAGAGCTTCCGGGACGACGCCAAGGTCCTTTCCTTCTGCAAGAACCACGACGCGATCTGGTCCGAAATTGGGAAAGGCTACTTGGACGGCTCCCTGGAGAAGAGCTCCAGCAGGAGAGGCCATTACGAGAAGGcTCTGTCGGAGATGGAGTCGGTGCTGTTGTCAGTGGCGAAGGAGAGGAAAGGCCAGAGGAAGCAGACGGCGTTTGTGGACACTCTGCTCCAGTCCGGCCTCACAGAGCGACAGatCATGGAGGACTGTATGGTTTTCACTTTGGCCGGCTGCATCATCACTGCCAACTTGTGTGTCTGGGCACTTCACTTCCTGTCCACCTCCGAAGAAGTTCAGGACAAACTGTATCAGGAGCTGGAGGAGGTGTTGGGTTCGGACCCAGTTTCCTTGGACAAGATCCCTCAGCTCAGATACTGCCAGCAGGTCCTCAACGAGACGGTGAGGACCGCCAAGCTGACCCCCATCGCGGCTCGGCTTCAGGGAGTGGAGGGCAAAGTCGATCAGCACGTCATCCCCAAAGAGACTTTGGTCATCTACGCTTTGGGAGTGGTCCTGCAAGATTCGGACACCTGGAGCGCCCCATACAGGTTTGACCCAGATCGATTTGAGGAGGAATCCGCCAGGAAGAGTTTCTGTCTGCTCGGATTCTCAGGGAATCAAACCTGCCCAGAACTCAGGTTTGCCTACACCGTCGCTACTGTCCTGCTCAGCACGTTGGTGCGCCAGCTGAAGCTTCACCAGTTGAAGGGACAGGTCATGGAAGTCCGATCTGAGCTGGTGTCCACACCTAAGGACGAAACTTGGATTACCGTCAGCAGAAAAGGCTAGAACtattcttgaaaaaaaaacggCACAGGGGAGCAGAGctgtttctaaaaaaaaatctatatatatttaacatctTGATTAAAGGACCACCAAAAGTATTTCTTAAATGTTGAAGATCCAGTCTGCCGGAGAAACATCATTTCTCACATTAACTCCTGTCTTTCTAAACAACATTATGATAGTTGACACTTTTGGGAATTAAACACTTACAGGgttaactactgtttttttcgaccctattttcctatatttttgtgtctaagtgactgatgggaacaacaatgtttgacgttggtccagtattaagagagatcacTGCAGTCGGCAGTCAGAGAAACaaactacaatgtaagttaatagggcatcTTCAATTaacgctgacaggctcagattaatattctaagtgtctgacaacattatggaaaggatttctaaggaggtcgacctttctgttaaagagtacgacccttttttttaaaacataaaatcatcCGCGAAATTCGCTAAATCAAtcaaactccatgtaaataaacagtcattttagcatcgtagaatatacttcattcaaagtcgacagaaacaaaataaaactatgcaaagccgttttgggtcatctttccactttttcatCCATCACAACTCTGTAtactgaaataaacacatagtttacagatgtacatgtgaaaatatgttggctctatacacgctaaaagtattgttttttttaaatggagtctggtgggtttagcgctagcgacctcagatccgtttctggttaaacagagaggtcttaaagaggttttaaaggtctgtctctgtagggatcctttcattAAAGTTGTCAgccacttagaataataatatgAGCCTTTCAGTGGCAAGAACTGCACTTTTAGTGGAGGATattgacaatgcacatttgccccataggtctgtagggttacattgcagcctggtctgtggctgccggttacagcgttcacgcttaatactggaccaatgtcaaagattgttgttcccatcagtcacttacacacaaaaacacaggaaaatagGGGGGGGAAAACAGTAGTTACTCTTTAATTTGCATCAGTCCTGAAGGCACCACCACAGTATTTCCATAGATGTCTTCCTGGTGCTTTTAATTGTTTCAGTAATCTGAAACCTTAAGCACATTGTTACCTTGTCTGTTCAGTTTCGATTTGCActtattgaaatatgttcaaGGAGGGAAACTCTGTGGTTTAAAACTCTACGATGGAGAGAAAAACAACTTGTGCTGCCAAATGTTTTTCTATAATTCTTAGTGCAGTTGCCTTGAGTCACAAAATTCCTAATAACATGGGGCTTGTTTGTCCGTTGATATGGCTCTACGTGGCAATTTAGACATTTCATtccttttttaattaaacacggttgcatattacattttattaaatatgtTTGAGGATTCTG

Function

NR:

description
PREDICTED: cytochrome P450 20A1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen molecular_function
GO:0005506 iron ion binding molecular_function
GO:0020037 heme binding molecular_function

KEGG:

id description
K07435 CYP20A; cytochrome P450 family 20 subfamily A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793727.1 True 3218 mRNA 0.45 13 18143977 18158300

Neighbor

gene id symbol gene type direction distance location
abi2b abi2 coding downstream 524 18113995 ~ 18143453 (-)
LOC120554632 LOC103360035,LOC103370267 coding downstream 41946 18029836 ~ 18102031 (-)
LOC120554265 NA coding downstream 170800 17971201 ~ 17973177 (-)
LOC120554266 NA coding downstream 174574 17967966 ~ 17969403 (-)
LOC120554256 NA coding downstream 176168 17966724 ~ 17967809 (-)
LOC120554723 NA coding upstream 1516 18159816 ~ 18176708 (-)
LOC120554053 mpp4 coding upstream 19270 18177570 ~ 18186577 (-)
LOC120554369 LOC104960229 coding upstream 104536 18262836 ~ 18269669 (-)
LOC120554384 NA coding upstream 170208 18328508 ~ 18340419 (-)
LOC120554329 LOC100698054,LOC102783597 coding upstream 184413 18342713 ~ 18353343 (-)
G235793 NA non-coding downstream 30020 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 157799 17985922 ~ 17986178 (-)
G235725 NA non-coding downstream 200480 17943210 ~ 17943497 (-)
G235724 NA non-coding downstream 203650 17934775 ~ 17940327 (-)
G235723 NA non-coding downstream 212992 17930532 ~ 17930985 (-)
G235816 NA non-coding upstream 52203 18210503 ~ 18214168 (-)
G235844 NA non-coding upstream 94524 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding upstream 98643 18256943 ~ 18257506 (-)
G235908 NA non-coding upstream 375147 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 438699 18596999 ~ 18597208 (-)
s100b LOC103360204,LOC104927403 other downstream 398720 17734731 ~ 17745257 (-)
G235350 NA other downstream 1040460 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1387912 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1401689 16736186 ~ 16742288 (-)
G235387 NA other downstream 1527661 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 112778 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 245926 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1365204 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1573019 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2209041 20367341 ~ 20368433 (-)

Expression


Co-expression Network