LOC120554723


Basic Information

Item Value
gene id LOC120554723
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18159816 ~ 18176708 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793728.1
CCACTCGTAAATGCATCCGGGTAACCGCTCTCCACTTCTAGAGCATAAACAAAGAAATAATCCTAAAAAGTAGCAGTTTATTCACGTGTAAACGGCTCTAGCCGTTAACATTTACTTGTCAACTAAAGATGATTTAACTGGATGTGCATTTAAAGGCACGTTTCAGGCAGAAATTGCATAGTATGGATACAGAAGGCTCGAAGAAAATGCGAGCCAGGGAGCTCCCGCCTCTTCCACAGCGTGGACAGCGATCACTTCCCACAATGCCAAGTCCAGACCCAGATGGAGAAGTACCGGCGCCAAAACATAAGAAGAAGAGGTCGAGAAAGGAGACGAATGGAGTCGATGAAATTGACGATCATGGGATGAAAATGGGAGGCCTGGGCAGCCGGAGGGAGTCTGAGTTTGGAGAGCAACTTTCCCCTGAACCCACGACGGACGCTCCGcctcagaggaggaagaggaaaaagaaaaccgCCCCTATAGAACTTGGCGATAACCAAGCCGACCTGGTGAATGGAGATACAGCCGACACCACCGATGGAGAAGAACTGGTCAAAAGaaccaaaaagaaaaaGAAGCCTAAAGTCGCTGACTCCCACCTTCCCGATGAGTTGGACATAGAAGAGGACGATATTATCACCGACACCCCTCCTCCTATTTCCCAGCATTCCCTGTTCTCGGCCCCGCAGGGTCAGAGCCAGCCGGTGGGGAAAGTCTTTGTCGAGAGGAACAAGCGTTTCCAGGCCACCGAGCACCCTGACTGGAGGAAGACCAAAAACCATATGGATGACATGACTGACTTCCAGCCCACCTGGACCACCAGAGAGGTTTCTATGAATGTGCACAAAGGCTTCAGGTTGTTCGGTCTGTATTGTCACGGCTTCCTGGCGGGCTACGCCGTGTGGAACGTCGTGGTGGTGTACATGTTAGCCGGGCAGCACCTCACCGATCTGTCCAACCTGCTGGAGCAGTACCACAGCCTGGCGTACCCGTCCCAGTCGCTGCTCTACATGCTGCTGGCCATCAGCACGGTGGCCGCCTTCGACCGAGTGGACCTGGCCAAAGGCTCCTTGGCCCTGCAGGACTTCCTCACACTGGACCGCGTGGCTCTCGCCTCTTTCTTGTATTTCTCAGCGTTGGTCCTCTCTCTGAGCCAGCAGATGACCAGCGATCGCATCAACCTGTACCCAGCCCTCAACGCAACGTTATGGCCCCCGGGGTTAGAGCACCAGATTCTCCACCCGTGGGTGACCGTCAACCTGGTGGTGGCTCTGCTGGTGGGGCTGGCCTGGGTCTTCATCGCCACGCGGCCGGAAACAGACCGCACTGCAGagtATCTGGAAACCATGGTGATTGAGCCTCCCGAACCAGAGGACAAATCTGAAATGACCGCCTGAGAATAAGTCATCTGCACACCTGCTCCGACACACTGTACAGCTTTGACACGTGGCACATATTTTTGCACTGTATTTTCGACAGTGAACTCTGAAAATGTTGtagattatttttgtattttggaaACGTGCATGTGCTTGTCGCTCTATAAATATTTATCCAACAAATCCAA
>XM_039793729.1
AGGGGATTTAACAGTGTCAGCCAGGTTGTTACATAGCTGCTTTCCACTCTGACTTTGATTCCTGCGTGGAATGGCCAGAAAGACGACGCGTGGACAGCGATCACTTCCCACAATGCCAAGTCCAGACCCAGATGGAGAAGTACCGGCGCCAAAACATAAGAAGAAGAGGTCGAGAAAGGAGACGAATGGAGTCGATGAAATTGACGATCATGGGATGAAAATGGGAGGCCTGGGCAGCCGGAGGGAGTCTGAGTTTGGAGAGCAACTTTCCCCTGAACCCACGACGGACGCTCCGcctcagaggaggaagaggaaaaagaaaaccgCCCCTATAGAACTTGGCGATAACCAAGCCGACCTGGTGAATGGAGATACAGCCGACACCACCGATGGAGAAGAACTGGTCAAAAGaaccaaaaagaaaaaGAAGCCTAAAGTCGCTGACTCCCACCTTCCCGATGAGTTGGACATAGAAGAGGACGATATTATCACCGACACCCCTCCTCCTATTTCCCAGCATTCCCTGTTCTCGGCCCCGCAGGGTCAGAGCCAGCCGGTGGGGAAAGTCTTTGTCGAGAGGAACAAGCGTTTCCAGGCCACCGAGCACCCTGACTGGAGGAAGACCAAAAACCATATGGATGACATGACTGACTTCCAGCCCACCTGGACCACCAGAGAGGTTTCTATGAATGTGCACAAAGGCTTCAGGTTGTTCGGTCTGTATTGTCACGGCTTCCTGGCGGGCTACGCCGTGTGGAACGTCGTGGTGGTGTACATGTTAGCCGGGCAGCACCTCACCGATCTGTCCAACCTGCTGGAGCAGTACCACAGCCTGGCGTACCCGTCCCAGTCGCTGCTCTACATGCTGCTGGCCATCAGCACGGTGGCCGCCTTCGACCGAGTGGACCTGGCCAAAGGCTCCTTGGCCCTGCAGGACTTCCTCACACTGGACCGCGTGGCTCTCGCCTCTTTCTTGTATTTCTCAGCGTTGGTCCTCTCTCTGAGCCAGCAGATGACCAGCGATCGCATCAACCTGTACCCAGCCCTCAACGCAACGTTATGGCCCCCGGGGTTAGAGCACCAGATTCTCCACCCGTGGGTGACCGTCAACCTGGTGGTGGCTCTGCTGGTGGGGCTGGCCTGGGTCTTCATCGCCACGCGGCCGGAAACAGACCGCACTGCAGagtATCTGGAAACCATGGTGATTGAGCCTCCCGAACCAGAGGACAAATCTGAAATGACCGCCTGAGAATAAGTCATCTGCACACCTGCTCCGACACACTGTACAGCTTTGACACGTGGCACATATTTTTGCACTGTATTTTCGACAGTGAACTCTGAAAATGTTGtagattatttttgtattttggaaACGTGCATGTGCTTGTCGCTCTATAAATATTTATCCAACAAATCCAA
>XM_039793730.1
CACTCGTAAATGCATCCGGGTAACCGCTCTCCACTTCTAGAGCATAAACAAAGAAATAATCCTAAAAAGTAGCAGTTTATTCACGTGTAAACGGCTCTAGCCGTTAACATTTACTTGTCAACTAAAGATGATTTAACTGGATGTGCATTTAAAGGCACGTTTCAGGCAGAAATTGCATAGTATGGATACAGAAGGCTCGAAGAAAATGCGAGCCAGGGAGCTCCCGCCTCTTCCACAGGAGAAGTACCGGCGCCAAAACATAAGAAGAAGAGGTCGAGAAAGGAGACGAATGGAGTCGATGAAATTGACGATCATGGGATGAAAATGGGAGGCCTGGGCAGCCGGAGGGAGTCTGAGTTTGGAGAGCAACTTTCCCCTGAACCCACGACGGACGCTCCGcctcagaggaggaagaggaaaaagaaaaccgCCCCTATAGAACTTGGCGATAACCAAGCCGACCTGGTGAATGGAGATACAGCCGACACCACCGATGGAGAAGAACTGGTCAAAAGaaccaaaaagaaaaaGAAGCCTAAAGTCGCTGACTCCCACCTTCCCGATGAGTTGGACATAGAAGAGGACGATATTATCACCGACACCCCTCCTCCTATTTCCCAGCATTCCCTGTTCTCGGCCCCGCAGGGTCAGAGCCAGCCGGTGGGGAAAGTCTTTGTCGAGAGGAACAAGCGTTTCCAGGCCACCGAGCACCCTGACTGGAGGAAGACCAAAAACCATATGGATGACATGACTGACTTCCAGCCCACCTGGACCACCAGAGAGGTTTCTATGAATGTGCACAAAGGCTTCAGGTTGTTCGGTCTGTATTGTCACGGCTTCCTGGCGGGCTACGCCGTGTGGAACGTCGTGGTGGTGTACATGTTAGCCGGGCAGCACCTCACCGATCTGTCCAACCTGCTGGAGCAGTACCACAGCCTGGCGTACCCGTCCCAGTCGCTGCTCTACATGCTGCTGGCCATCAGCACGGTGGCCGCCTTCGACCGAGTGGACCTGGCCAAAGGCTCCTTGGCCCTGCAGGACTTCCTCACACTGGACCGCGTGGCTCTCGCCTCTTTCTTGTATTTCTCAGCGTTGGTCCTCTCTCTGAGCCAGCAGATGACCAGCGATCGCATCAACCTGTACCCAGCCCTCAACGCAACGTTATGGCCCCCGGGGTTAGAGCACCAGATTCTCCACCCGTGGGTGACCGTCAACCTGGTGGTGGCTCTGCTGGTGGGGCTGGCCTGGGTCTTCATCGCCACGCGGCCGGAAACAGACCGCACTGCAGagtATCTGGAAACCATGGTGATTGAGCCTCCCGAACCAGAGGACAAATCTGAAATGACCGCCTGAGAATAAGTCATCTGCACACCTGCTCCGACACACTGTACAGCTTTGACACGTGGCACATATTTTTGCACTGTATTTTCGACAGTGAACTCTGAAAATGTTGtagattatttttgtattttggaaACGTGCATGTGCTTGTCGCTCTATAAATATTTATCCAACAAATCCAA

Function

GO:

id name namespace
GO:0060027 convergent extension involved in gastrulation biological_process

KEGG:

id description
K22765 TMEM237; transmembrane protein 237

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793728.1 True 1570 mRNA 0.52 14 18159816 18176708
XM_039793729.1 False 1419 mRNA 0.54 13 18159816 18174157
XM_039793730.1 False 1523 mRNA 0.52 12 18159816 18176707

Neighbor

gene id symbol gene type direction distance location
LOC120554721 LOC104966233,LOC100698939 coding downstream 1516 18143977 ~ 18158300 (-)
abi2b abi2 coding downstream 16363 18113995 ~ 18143453 (-)
LOC120554632 LOC103360035,LOC103370267 coding downstream 57785 18029836 ~ 18102031 (-)
LOC120554265 NA coding downstream 186639 17971201 ~ 17973177 (-)
LOC120554266 NA coding downstream 190413 17967966 ~ 17969403 (-)
LOC120554053 mpp4 coding upstream 862 18177570 ~ 18186577 (-)
LOC120554369 LOC104960229 coding upstream 86128 18262836 ~ 18269669 (-)
LOC120554384 NA coding upstream 151800 18328508 ~ 18340419 (-)
LOC120554329 LOC100698054,LOC102783597 coding upstream 166005 18342713 ~ 18353343 (-)
LOC120554003 LOC103370269 coding upstream 180396 18357104 ~ 18402213 (-)
G235793 NA non-coding downstream 45859 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 173638 17985922 ~ 17986178 (-)
G235725 NA non-coding downstream 216319 17943210 ~ 17943497 (-)
G235724 NA non-coding downstream 219489 17934775 ~ 17940327 (-)
G235723 NA non-coding downstream 228831 17930532 ~ 17930985 (-)
G235816 NA non-coding upstream 33795 18210503 ~ 18214168 (-)
G235844 NA non-coding upstream 76116 18252824 ~ 18300953 (-)
LOC120554613 NA non-coding upstream 80235 18256943 ~ 18257506 (-)
G235908 NA non-coding upstream 356739 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 420291 18596999 ~ 18597208 (-)
s100b LOC103360204,LOC104927403 other downstream 414559 17734731 ~ 17745257 (-)
G235350 NA other downstream 1056299 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1403751 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1417528 16736186 ~ 16742288 (-)
G235387 NA other downstream 1543500 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 94370 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 227518 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1346796 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1554611 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2190633 20367341 ~ 20368433 (-)

Expression


Co-expression Network