LOC120554795


Basic Information

Item Value
gene id LOC120554795
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 12954106 ~ 12959563 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039793818.1
cctttaactctttaaatttctGTGTCTGAAAGAAGTGGAGCGGTGTGTTAATAAATGACCTCCTTAAACATGTTGGATTCAAGAGGGAACGACACCAGGGGAAGCGAGAGTCTGCAAATGTTGACCAACTTCAAACAGAACAATAAcgGCTTTCTTATCACTGATCCCAGGCCACCAGAATACGTACACGCTGTGCACAAGAAGACTGTGAAAGAACTGCTCATGATGAGACGCAAGaaacTGAACTGCTCACAGGACGACAACAACTTGGtgcatacatttaaatgtacaAAATTCGAAGCTTTTCCCAATGACCTGAGTCCTCACCTGTTGGGCCCTTCAGGATCGGTTAACTCCAATATTACGTATAATGTCCCCCATGCTCCTCCTGAAAATGGTCACATTGCCCCACAAGAACATCTGCAAAATCCGCCTCTGCAGGGACAAGTGGCTCCGACTGCTGAAGTAAAAATGACTTTATTTCACTGGCAAGTACAGCGAGAGGCACAGAGGATTGAAAGAGTTTCTCCTGAGCTGCTGAACATGCAAGATGCGGATGGTGACACTTGTCTTCACATAGCAGTGGCACAAGGTAGACGGGCTCTGGCTTATGTGCTTGCTACAAAAATGGCTCAATGTGGCTCTCTGGACACGAAGGAACACAATGGGCAGACAGCTCTTCAGATAGCAGCTGCCACTAACCAGCAGCTCATAGTTCACGATCTGCTGGCACAAGGAGCACAAATCAACACTCGAGACATCTGGGGGCGATCTCCTTTACACGTGTGTGCTGAGAAAGgccatttttccagtcttcagAGCATCTGGAGGACCCTTATGGGGAGTGGAGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039793818.1 True 855 mRNA 0.47 8 12954106 12959563

Neighbor

gene id symbol gene type direction distance location
filip1l filip1l,LOC100693076,LOC102798342,LOC102213048 coding downstream 69008 12797844 ~ 12885098 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding downstream 309749 12602244 ~ 12644357 (-)
obsl1a obsl1,LOC102777652,LOC100691457 coding downstream 571092 12368396 ~ 12383014 (-)
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding downstream 1104283 11839717 ~ 11849823 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding downstream 1229967 11718181 ~ 11724139 (-)
gk LOC100693874,LOC101471943 coding upstream 2312 12961875 ~ 12984575 (-)
trnae-uuc_66 NA coding upstream 26254 12985817 ~ 12985888 (-)
mtrf1 mtrf1,LOC104961503 coding upstream 33275 12992838 ~ 12995995 (-)
zgc:65895 tsc22d1,LOC106531085,LOC102196627,LOC106942021,LOC103477739,LOC103130603 coding upstream 61485 13021048 ~ 13048596 (-)
trnad-guc_30 NA coding upstream 97053 13056616 ~ 13056687 (-)
G234375 NA non-coding downstream 168163 12783991 ~ 12785943 (-)
G234373 NA non-coding downstream 173946 12779586 ~ 12780160 (-)
G234333 NA non-coding downstream 465098 12487905 ~ 12489008 (-)
G234330 NA non-coding downstream 466776 12436996 ~ 12487330 (-)
G234328 NA non-coding downstream 519363 12432847 ~ 12434743 (-)
G234434 NA non-coding upstream 28810 12988373 ~ 12991438 (-)
G234478 NA non-coding upstream 202169 13161732 ~ 13162096 (-)
G234490 NA non-coding upstream 240415 13199978 ~ 13200294 (-)
G234491 NA non-coding upstream 243359 13202922 ~ 13205960 (-)
G234523 NA non-coding upstream 471418 13430981 ~ 13439811 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 660963 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 1415785 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 1464629 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 1512180 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 1814861 11136627 ~ 11139245 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 1234749 14194312 ~ 14290043 (-)
G234898 NA other upstream 1888271 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 2006753 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 3289131 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 3366530 16326093 ~ 16352877 (-)

Expression


Co-expression Network