LOC120554017


Basic Information

Item Value
gene id LOC120554017
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20695924 ~ 20696532 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638268.1
AAAAAACATACTGCGAGACTTGCGGCAGATGGCACTGTTCAAACACACAGGGTCCCTGGAAGTTTTCCATTCATCAATGCTAAAGTATACGCAGAAAAGGCTTCACTTTTCATATGACGTAATGCTGGCCAGAACCCAACTTGCGGTTATGGACCACAACGCCAATGTTGGCAAGGAGCAGGCCAAAACAAAGCAAGgACAACCGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638268.1 True 207 lncRNA 0.47 3 20695924 20696532

Neighbor

gene id symbol gene type direction distance location
LOC120554008 NA coding upstream 1313 20692960 ~ 20694611 (+)
LOC120554612 rcan1,LOC103389732 coding upstream 215598 20459974 ~ 20480326 (+)
gyg2 NA coding upstream 276806 20409012 ~ 20419118 (+)
fam207a NA coding upstream 354021 20312524 ~ 20341903 (+)
LOC120554617 LOC108431163 coding upstream 370302 20323492 ~ 20325622 (+)
LOC120554009 NA coding downstream 9860 20706392 ~ 20707535 (+)
ebpl NA coding downstream 191437 20887969 ~ 20889752 (+)
eef1b2 eef1b2,LOC102792575 coding downstream 255620 20952152 ~ 20956272 (+)
LOC120554650 NA coding downstream 315962 21012494 ~ 21026525 (+)
LOC120554642 NA coding downstream 330520 21027052 ~ 21047316 (+)
G236334 NA non-coding upstream 18493 20677188 ~ 20677431 (+)
LOC120554584 NA non-coding upstream 33139 20661377 ~ 20662785 (+)
G236313 NA non-coding upstream 137325 20558255 ~ 20558599 (+)
G236312 NA non-coding upstream 137829 20557892 ~ 20558095 (+)
G236304 NA non-coding upstream 183936 20511674 ~ 20511988 (+)
G236346 NA non-coding downstream 56084 20752616 ~ 20753017 (+)
G236355 NA non-coding downstream 90417 20786949 ~ 20837810 (+)
G236361 NA non-coding downstream 96934 20793466 ~ 20795400 (+)
G236364 NA non-coding downstream 104316 20800848 ~ 20871610 (+)
G236360 NA non-coding downstream 168982 20865514 ~ 20866411 (+)
LOC120554627 runx1,LOC104961881 other upstream 60002 20595095 ~ 20635922 (+)
LOC120554724 plcd4,LOC103363317 other upstream 184848 20487667 ~ 20511076 (+)
cd99 NA other upstream 289598 20383318 ~ 20406326 (+)
LOC120554192 adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 other upstream 318184 20355302 ~ 20377740 (+)
prkx prkx other upstream 461072 20208329 ~ 20234852 (+)
fmnl2b LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 other downstream 72944 20769476 ~ 20841778 (+)
cavin2b NA other downstream 149116 20845648 ~ 20887369 (+)
G236394 NA other downstream 216123 20912655 ~ 20916777 (+)
zdbf2 NA other downstream 260417 20956949 ~ 20964585 (+)
LOC120554011 cd59,LOC102793758,LOC101486506,LOC100705993,LOC104934006,LOC103366567 other downstream 279540 20976072 ~ 21077796 (+)

Expression


Co-expression Network