Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120554047 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 20283156 ~ 20284898 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005638292.1 | True | 379 | lncRNA | 0.46 | 4 | 20283156 | 20284898 |
| XR_005638293.1 | False | 376 | lncRNA | 0.47 | 4 | 20283156 | 20284898 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mxra5a | NA | coding | upstream | 11860 | 20258343 ~ 20271296 (+) |
| LOC120554034 | NA | coding | upstream | 248427 | 20029026 ~ 20034729 (+) |
| LOC120554605 | pudp | coding | upstream | 431202 | 19839605 ~ 19851954 (+) |
| LOC120554006 | NA | coding | upstream | 450948 | 19819866 ~ 19832208 (+) |
| LOC120554574 | NA | coding | upstream | 464673 | 19816765 ~ 19818483 (+) |
| fam207a | NA | coding | downstream | 27626 | 20312524 ~ 20341903 (+) |
| LOC120554617 | LOC108431163 | coding | downstream | 38594 | 20323492 ~ 20325622 (+) |
| gyg2 | NA | coding | downstream | 124114 | 20409012 ~ 20419118 (+) |
| LOC120554612 | rcan1,LOC103389732 | coding | downstream | 175076 | 20459974 ~ 20480326 (+) |
| LOC120554008 | NA | coding | downstream | 408062 | 20692960 ~ 20694611 (+) |
| G236199 | NA | non-coding | upstream | 75220 | 20207730 ~ 20207936 (+) |
| G236196 | NA | non-coding | upstream | 97276 | 20185653 ~ 20185880 (+) |
| G236189 | NA | non-coding | upstream | 188277 | 20094348 ~ 20094879 (+) |
| G236187 | NA | non-coding | upstream | 199875 | 20083028 ~ 20083281 (+) |
| G236179 | LOC104947167 | non-coding | upstream | 212516 | 20070106 ~ 20070640 (+) |
| G236258 | NA | non-coding | downstream | 13478 | 20298376 ~ 20298640 (+) |
| G236260 | NA | non-coding | downstream | 49463 | 20334361 ~ 20334970 (+) |
| G236268 | NA | non-coding | downstream | 93527 | 20378425 ~ 20380497 (+) |
| G236304 | NA | non-coding | downstream | 226776 | 20511674 ~ 20511988 (+) |
| G236312 | NA | non-coding | downstream | 272994 | 20557892 ~ 20558095 (+) |
| prkx | prkx | other | upstream | 48304 | 20208329 ~ 20234852 (+) |
| G236162 | NA | other | upstream | 285489 | 19996799 ~ 19997667 (+) |
| nlgn4xa | nlgn4x,nlgn4a,nlgn4,LOC102297792,LOC102198379,LOC102795219 | other | upstream | 296427 | 19897092 ~ 19986729 (+) |
| anos1a | LOC103358938 | other | upstream | 584261 | 19671872 ~ 19698895 (+) |
| G235778 | NA | other | upstream | 2101344 | 18176825 ~ 18181812 (+) |
| LOC120554192 | adarb1,dhrsx,LOC103363325,LOC104961879,LOC106908010,LOC106908011,LOC103156197,LOC103156196 | other | downstream | 70404 | 20355302 ~ 20377740 (+) |
| cd99 | NA | other | downstream | 98420 | 20383318 ~ 20406326 (+) |
| LOC120554724 | plcd4,LOC103363317 | other | downstream | 202769 | 20487667 ~ 20511076 (+) |
| LOC120554627 | runx1,LOC104961881 | other | downstream | 310197 | 20595095 ~ 20635922 (+) |
| fmnl2b | LOC101465085,LOC102790854,LOC102292591,LOC106517599,LOC100693318 | other | downstream | 484578 | 20769476 ~ 20841778 (+) |
