LOC120554060


Basic Information

Item Value
gene id LOC120554060
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 12402989 ~ 12424938 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638300.1
GGAGGAGGGACCAGCCAGAAATATTATCTGGCCACAGGTGAGCAGGAGGAGGGAAAAGAGCTGGACAGAAAGAGTTGGACGGTGTGAAACGGAGGACCGGGGTGGGGGGAACGATGGACCTGGGGAGCAGCATTACACCTGTCTGTGGTCTAAGAACAATGAAACATTGTGGGAcgtgcaggacccgagcagaccTACGACGCTGTCCCAGggCTGAGCTCCAGCTTCTTCTACCAGAGCTTCTACCACCGGACCCCGGCGCAATAagttcaaatatccattatgtaGATATTGtgatttgtaattttttttttttatattggactaaaaataaagcattacaatAGTCTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638300.1 True 354 lncRNA 0.49 3 12402989 12424938

Neighbor

gene id symbol gene type direction distance location
obsl1a obsl1,LOC102777652,LOC100691457 coding downstream 19975 12368396 ~ 12383014 (-)
LOC120554168 LOC104928316,LOC103357968,LOC104957755 coding downstream 553166 11839717 ~ 11849823 (-)
LOC120554156 LOC104957759,LOC101074451,LOC100697446,LOC103389560 coding downstream 678850 11718181 ~ 11724139 (-)
LOC120554155 ccnyl1,LOC103374641,LOC104957757,LOC101466371,LOC100696912 coding downstream 687839 11708327 ~ 11715150 (-)
tns1a NA coding downstream 718556 11567571 ~ 11684433 (-)
LOC120554061 LOC101475634,LOC102213813,LOC107377203,LOC108242213,LOC106525271 coding upstream 177306 12602244 ~ 12644357 (-)
filip1l filip1l,LOC100693076,LOC102798342,LOC102213048 coding upstream 372906 12797844 ~ 12885098 (-)
LOC120554312 NA coding upstream 526483 12951421 ~ 12954215 (-)
LOC120554795 NA coding upstream 529168 12954106 ~ 12959563 (-)
gk LOC100693874,LOC101471943 coding upstream 536937 12961875 ~ 12984575 (-)
G234311 NA non-coding downstream 41720 12358763 ~ 12361269 (-)
G234238 myl1,LOC101075868,LOC104929359 non-coding downstream 132920 12200076 ~ 12270069 (-)
G234240 NA non-coding downstream 190380 12210934 ~ 12212609 (-)
G234225 NA non-coding downstream 201561 12122240 ~ 12201428 (-)
G234194 NA non-coding downstream 580487 11798563 ~ 11822502 (-)
G234328 NA non-coding upstream 7909 12432847 ~ 12434743 (-)
G234330 NA non-coding upstream 12058 12436996 ~ 12487330 (-)
G234333 NA non-coding upstream 62967 12487905 ~ 12489008 (-)
G234373 NA non-coding upstream 354648 12779586 ~ 12780160 (-)
G234375 NA non-coding upstream 359053 12783991 ~ 12785943 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 109846 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 864668 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 913512 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 961063 11388552 ~ 11441926 (-)
LOC120554131 NA other downstream 1263744 11136627 ~ 11139245 (-)
G234405 NA other upstream 528152 12953090 ~ 12954125 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 1769374 14194312 ~ 14290043 (-)
G234898 NA other upstream 2422896 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 2541378 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 3823756 16248694 ~ 16288150 (-)

Expression


Co-expression Network