LOC120554121


Basic Information

Item Value
gene id LOC120554121
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 10957910 ~ 10958290 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638318.1
AtcatgtcttttcttttcttttttaggtaTTGATGAGGAATCTGAAACTAATAATAGTGATCGCAGTAGGACTTGGATCATATTGTCTGTGGtagcctgtgtttgtgttgctgctgtcatCATCACTGCCAGGCTTAGACAAAAAAAATCCCAACAGTCTGTCACACAGGGACTCTGAGGAGAACATGACGGACAACACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638318.1 True 201 lncRNA 0.41 3 10957910 10958290

Neighbor

gene id symbol gene type direction distance location
LOC120554115 NA coding downstream 10408 10931280 ~ 10947502 (-)
LOC120554111 u2af1,LOC102219527,LOC105917412,LOC103389252,LOC107380862,LOC101158751 coding downstream 58250 10885752 ~ 10899660 (-)
LOC120554104 NA coding downstream 90407 10854723 ~ 10867503 (-)
LOC120554097 LOC100699868,LOC108246800,LOC102211082,LOC101482602,LOC102799187,LOC106525709 coding downstream 172057 10784874 ~ 10785853 (-)
LOC120554100 LOC103371276,LOC104950903,LOC100700136 coding downstream 175382 10780954 ~ 10782528 (-)
LOC120554119 NA coding upstream 8845 10967135 ~ 10989049 (-)
LOC120554120 NA coding upstream 32259 10990549 ~ 10995360 (-)
LOC120554123 NA coding upstream 52942 11011232 ~ 11013638 (-)
LOC120554124 NA coding upstream 55705 11013995 ~ 11018662 (-)
LOC120554122 NA coding upstream 62543 11020833 ~ 11029361 (-)
G233939 NA non-coding downstream 34094 10915974 ~ 10923816 (-)
LOC120554109 NA non-coding downstream 109555 10837792 ~ 10848355 (-)
G233918 NA non-coding downstream 126780 10829346 ~ 10831130 (-)
LOC120554110 NA non-coding downstream 127650 10824907 ~ 10830260 (-)
G233913 NA non-coding downstream 133054 10818253 ~ 10824856 (-)
G234024 NA non-coding upstream 82896 11041186 ~ 11094182 (-)
G234026 NA non-coding upstream 102521 11060811 ~ 11083168 (-)
G234032 NA non-coding upstream 193552 11151842 ~ 11152551 (-)
G234051 NA non-coding upstream 326502 11284792 ~ 11285090 (-)
G234063 NA non-coding upstream 347321 11305611 ~ 11306703 (-)
si:ch211-132g1.7 ptgfrn,LOC104953994 other downstream 432825 10464322 ~ 10525085 (-)
LOC120554082 NA other downstream 569977 10383688 ~ 10387933 (-)
G233703 atg13 other downstream 685051 10271069 ~ 10272859 (-)
arhgef7b arhgef7,LOC102205121,LOC101465658,LOC100696931 other downstream 781100 10152861 ~ 10176810 (-)
G233644 NA other downstream 915504 9965692 ~ 10042406 (-)
LOC120554127 NA other upstream 79065 11037355 ~ 11046959 (-)
LOC120554131 NA other upstream 178337 11136627 ~ 11139245 (-)
spega LOC103358966 other upstream 430262 11388552 ~ 11441926 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other upstream 500647 11458937 ~ 11489477 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other upstream 566092 11524382 ~ 11538321 (-)

Expression


Co-expression Network