LOC120554285


Basic Information

Item Value
gene id LOC120554285
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17183355 ~ 17204668 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638358.1
gttccTGTGGGTCCTGTTCGTATGTAGTTGTGAGTTGGTCCTCCTGCTGAAACCGTGACATAAAGCTAAAAGGGGGAGTGACACAGACTACGGGCGAAAAACTGAGTCAACTTTGGTCGTGTTTTCAACGGATGGAGACAGTTgggggattgtaaatgattcaaaaccgacCCTGAATTGGCCCGCAGACAGGACAGAAACATGTGAACAGTGACTCTCAGGTGACAGGAGAGGAGATCCTACCTTTACACCAGGCGTTGAACAGCACGTACAGGTCGGTGGCGGCGTCCCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638358.1 True 295 lncRNA 0.52 3 17183355 17204668

Neighbor

gene id symbol gene type direction distance location
LOC120553999 NA coding upstream 4542 17169385 ~ 17178813 (+)
LOC120554254 NA coding upstream 58449 17113416 ~ 17124906 (+)
trnat-cgu_30 NA coding upstream 78142 17105141 ~ 17105213 (+)
trnat-agu_66 NA coding upstream 78714 17104568 ~ 17104641 (+)
trnat-cgu_29 NA coding upstream 109272 17074011 ~ 17074083 (+)
LOC120554211 NA coding downstream 16641 17221309 ~ 17268297 (+)
LOC120554229 NA coding downstream 84516 17289184 ~ 17306938 (+)
LOC120554209 NA coding downstream 135379 17340047 ~ 17343029 (+)
LOC120554248 LOC103366962 coding downstream 152779 17357447 ~ 17364065 (+)
LOC120554200 sh3bp4,LOC103360214 coding downstream 570864 17775532 ~ 17807753 (+)
LOC120554286 NA non-coding upstream 36863 17133116 ~ 17146492 (+)
G235332 NA non-coding upstream 247689 16934799 ~ 16935666 (+)
G235321 NA non-coding upstream 342526 16840186 ~ 16840829 (+)
G235284 NA non-coding upstream 588506 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 617311 16563427 ~ 16566044 (+)
G235497 NA non-coding downstream 108341 17313009 ~ 17313865 (+)
G235501 NA non-coding downstream 140797 17345465 ~ 17345923 (+)
G235530 NA non-coding downstream 145197 17349865 ~ 17350086 (+)
G235547 NA non-coding downstream 176237 17380905 ~ 17381200 (+)
G235548 NA non-coding downstream 178187 17382855 ~ 17383085 (+)
trnat-cgu_25 NA other upstream 231586 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 232861 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 250749 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 420747 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 421783 16761499 ~ 16761572 (+)
als2b NA other downstream 677797 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 748471 17953139 ~ 17966226 (+)
G235775 NA other downstream 962618 18167286 ~ 18171954 (+)
G235778 NA other downstream 972157 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 2467204 19671872 ~ 19698895 (+)

Expression


Co-expression Network