LOC120554286


Basic Information

Item Value
gene id LOC120554286
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17133116 ~ 17146492 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638359.1
GAGTGATTAGTGGATGGGTTGCAGGTGTGCAGCTGGGAGCAGGTGAACCAGCTTGGCACCAATCAGGAGCCAGGAGAGGGAGGGAATCACCACGGCAacaacacaggacacacagagaaagagagaggaaacagTTGGTGACATGAGCAcgtttctctgtctcttaccTGCAGCCTCTGTTTGAAGAGAGCACTGTGTCGGTGTGCTGCAGTGTCCTGtctgaaccccccccccacagcctGCGCTCTACAGAAGGACGGTTTCTTGGAGGATGGTGAAGAAATGTGGTTAAGGACTGGGACTCAATGACTCAAATGACCACATGTGAGTCCCGGGGAGTCCCATCAACATCACTGGGCtttaactgggacgttttgggaccgattggttgGAGTGCTGTGGCCGAAGTACGCGTGGCGgaacactgGTTTCTGTGTGAAAGTGACTGATGGAGCATCATGAATTggccagtattaagcgagattgACAgggaaacaagctacaatGTTTACAACTGTCACGACTTCCTTACCTCTGACAAACAGCCAGCTGGGTGAAGAGTCTCCAACCCCGCTGATGTGACACTTGTAGAGGCCTTCATCAGTCGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638359.1 True 610 lncRNA 0.52 4 17133116 17146492

Neighbor

gene id symbol gene type direction distance location
LOC120554254 NA coding upstream 8210 17113416 ~ 17124906 (+)
trnat-cgu_30 NA coding upstream 27903 17105141 ~ 17105213 (+)
trnat-agu_66 NA coding upstream 28475 17104568 ~ 17104641 (+)
LOC120554236 NA coding upstream 33635 17057688 ~ 17099481 (+)
trnat-cgu_29 NA coding upstream 59033 17074011 ~ 17074083 (+)
LOC120553999 NA coding downstream 22893 17169385 ~ 17178813 (+)
LOC120554211 NA coding downstream 74817 17221309 ~ 17268297 (+)
LOC120554229 NA coding downstream 142692 17289184 ~ 17306938 (+)
LOC120554209 NA coding downstream 193555 17340047 ~ 17343029 (+)
LOC120554248 LOC103366962 coding downstream 210955 17357447 ~ 17364065 (+)
G235332 NA non-coding upstream 197450 16934799 ~ 16935666 (+)
G235321 NA non-coding upstream 292287 16840186 ~ 16840829 (+)
G235284 NA non-coding upstream 538267 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 567072 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 609804 16523239 ~ 16523312 (+)
LOC120554285 NA non-coding downstream 36863 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 166517 17313009 ~ 17313865 (+)
G235501 NA non-coding downstream 198973 17345465 ~ 17345923 (+)
G235530 NA non-coding downstream 203373 17349865 ~ 17350086 (+)
G235547 NA non-coding downstream 234413 17380905 ~ 17381200 (+)
trnat-cgu_25 NA other upstream 181347 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 182622 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 200510 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 370508 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 371544 16761499 ~ 16761572 (+)
als2b NA other downstream 735973 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 806647 17953139 ~ 17966226 (+)
G235775 NA other downstream 1020794 18167286 ~ 18171954 (+)
G235778 NA other downstream 1030333 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 2525380 19671872 ~ 19698895 (+)

Expression


Co-expression Network