Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120554287 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 16505591 ~ 16506631 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005638360.1 | True | 260 | lncRNA | 0.41 | 3 | 16505591 | 16506631 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnat-cgu_16 | NA | coding | downstream | 661 | 16504858 ~ 16504930 (-) |
| trnam-cau_66 | NA | coding | downstream | 5061 | 16500458 ~ 16500530 (-) |
| trnat-agu_41 | NA | coding | downstream | 49130 | 16456388 ~ 16456461 (-) |
| trnat-agu_40 | NA | coding | downstream | 118746 | 16386772 ~ 16386845 (-) |
| LOC120554247 | NA | coding | downstream | 119296 | 16380312 ~ 16386295 (-) |
| LOC120554223 | NA | coding | upstream | 25331 | 16531962 ~ 16556455 (-) |
| LOC120554206 | NA | coding | upstream | 110072 | 16616703 ~ 16638195 (-) |
| trnat-agu_55 | NA | coding | upstream | 221803 | 16728434 ~ 16728507 (-) |
| trnat-ugu_45 | NA | coding | upstream | 357246 | 16863877 ~ 16863949 (-) |
| trnat-agu_60 | NA | coding | upstream | 357802 | 16864433 ~ 16864506 (-) |
| trnat-cgu_15 | NA | non-coding | downstream | 151642 | 16353877 ~ 16353949 (-) |
| LOC120554275 | NA | non-coding | downstream | 160326 | 16340797 ~ 16345265 (-) |
| G235351 | NA | non-coding | downstream | 181355 | 16322888 ~ 16324236 (-) |
| G235242 | NA | non-coding | downstream | 184074 | 16321111 ~ 16321517 (-) |
| G235225 | NA | non-coding | downstream | 260194 | 16245127 ~ 16245397 (-) |
| LOC120554273 | NA | non-coding | upstream | 56173 | 16562804 ~ 16567091 (-) |
| G235357 | NA | non-coding | upstream | 175096 | 16681727 ~ 16711192 (-) |
| G235413 | NA | non-coding | upstream | 260035 | 16766666 ~ 16775545 (-) |
| G235427 | NA | non-coding | upstream | 367204 | 16873835 ~ 16876854 (-) |
| LOC120554268 | NA | non-coding | upstream | 369378 | 16876009 ~ 16916699 (-) |
| LOC120554218 | NA | other | downstream | 152714 | 16326093 ~ 16352877 (-) |
| LOC120554197 | LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 | other | downstream | 217441 | 16248694 ~ 16288150 (-) |
| LOC120554377 | LOC103355861 | other | downstream | 1491777 | 14966316 ~ 15013814 (-) |
| G234898 | NA | other | downstream | 1655854 | 14847834 ~ 14849737 (-) |
| arhgap1 | arhgap1,LOC101474800,LOC102196105 | other | downstream | 2215548 | 14194312 ~ 14290043 (-) |
| G235387 | NA | other | upstream | 105352 | 16611983 ~ 16616316 (-) |
| LOC120554263 | NA | other | upstream | 229555 | 16736186 ~ 16742288 (-) |
| trnat-cgu_19 | NA | other | upstream | 249362 | 16755993 ~ 16756065 (-) |
| G235350 | NA | other | upstream | 557671 | 17064302 ~ 17103517 (-) |
| s100b | LOC103360204,LOC104927403 | other | upstream | 1228100 | 17734731 ~ 17745257 (-) |
