LOC120554363


Basic Information

Item Value
gene id LOC120554363
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20824834 ~ 20838767 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638381.1
GCGTCTCCAGTGACAGAAGCTCTACACGTCGCGGTGATTTTGGGAGATTTAGAGTGAATTCAAACTGTGAAACGTGTGAAACTGCCGGCCTCGGAGGTAACGAAGGTGTGTCCAGGTGTGTCCTGTTCAGAGCCTCACCAGCAGTCTGACGTTACATCTTCATGTTAAACATCAATAACTCCTGATTCGGTAATGCTCCTCGGAGTGGGCGGGGTCACAGAAGAAGCGAGAGCTGCGTTTTGCCGATCGGGCGGTGAAGGGGACGGTCTTCAGAGCTGCAGTACCGGGGGACCTACGTGTTGATGGCGCGGCAgatgacctctgacccctggCCGGCCTTCCTCAGAGTGATGGCCAGGTTTTTGGACCGGTTGGCGTCCAGCAGAGACACTTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638381.1 True 397 lncRNA 0.55 4 20824834 20838767

Neighbor

gene id symbol gene type direction distance location
LOC120554361 NA coding downstream 22564 20794346 ~ 20802270 (-)
LOC120554635 LOC104961873,LOC103363323 coding downstream 368771 20442981 ~ 20456063 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding downstream 444342 20375593 ~ 20380492 (-)
pnpla4 pnpla4 coding downstream 1068865 19749071 ~ 19755969 (-)
aox6 NA coding downstream 1170522 19622102 ~ 19654312 (-)
vps16 vps16 coding upstream 14798 20853565 ~ 20867800 (-)
dytn NA coding upstream 127171 20965938 ~ 21075255 (-)
ftcd ftcd coding upstream 152123 20990890 ~ 21003269 (-)
LOC120554641 LOC103473932 coding upstream 288127 21126894 ~ 21149363 (-)
LOC120554016 NA coding upstream 813199 21651966 ~ 21691088 (-)
LOC120554364 LOC100693318,LOC101465085,LOC102292591 non-coding downstream 19 20821734 ~ 20824815 (-)
G236569 NA non-coding downstream 23186 20801362 ~ 20801648 (-)
G236353 NA non-coding downstream 55669 20768705 ~ 20769165 (-)
G236350 NA non-coding downstream 62723 20761902 ~ 20762111 (-)
LOC120554725 NA non-coding downstream 70298 20753350 ~ 20754536 (-)
G236560 NA non-coding upstream 845 20839612 ~ 20841745 (-)
G236558 NA non-coding upstream 6884 20845651 ~ 20886276 (-)
G236610 NA non-coding upstream 20887 20859654 ~ 20918008 (-)
G236621 NA non-coding upstream 32233 20871000 ~ 20871638 (-)
G236607 NA non-coding upstream 32360 20871127 ~ 20874204 (-)
G236349 NA other downstream 63842 20760708 ~ 20760992 (-)
G236340 NA other downstream 96407 20726403 ~ 20728427 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other downstream 456401 20367341 ~ 20368433 (-)
G236111 sts,LOC108241831 other downstream 1092297 19731319 ~ 19732537 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 1295592 19523504 ~ 19529242 (-)
rgn LOC103371141 other upstream 4725 20843492 ~ 20853383 (-)
G236646 NA other upstream 23913 20862680 ~ 20863311 (-)
LOC120554644 NA other upstream 54147 20892914 ~ 20920498 (-)
arl11 NA other upstream 102221 20940988 ~ 20951865 (-)
LOC120554013 LOC103366577 other upstream 362229 21200996 ~ 21242177 (-)

Expression


Co-expression Network