LOC120554364 (LOC100693318,LOC101465085,LOC102292591)


Basic Information

Item Value
gene id LOC120554364
gene name LOC100693318,LOC101465085,LOC102292591
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20821734 ~ 20824815 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638382.1
TTTCTGTCGGGACAGAGTCAGGTCCACCGCAGGACCCTGAGCCTTTGTCTTAAACATCTCCTCAAACTCCTCCACGTTCAGATcctgggagacagacagGATAGCCTCGTCGTCGATGTCGTTAAAGACGGTCCCGTTGATCTGACTCGGCTTCAGAGCGACCCAGTTCAACACCGGCATCCGGAACTTCGTCTGGATTGGCTTCTTTATCTTCACCgctgcacagagagacagacagaGTTGATCAGGTGATCTATATCagcgctgtgattggtggagctGACGCTCACCTGTGCCTGGCATCGG

Function

NR:

description
PREDICTED: formin-like protein 2 isoform X3

GO:

id name namespace
GO:0030036 actin cytoskeleton organization biological_process
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638382.1 True 306 lncRNA 0.54 3 20821734 20824815

Neighbor

gene id symbol gene type direction distance location
LOC120554361 NA coding downstream 19464 20794346 ~ 20802270 (-)
LOC120554635 LOC104961873,LOC103363323 coding downstream 365671 20442981 ~ 20456063 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding downstream 441242 20375593 ~ 20380492 (-)
pnpla4 pnpla4 coding downstream 1065765 19749071 ~ 19755969 (-)
aox6 NA coding downstream 1167422 19622102 ~ 19654312 (-)
vps16 vps16 coding upstream 28750 20853565 ~ 20867800 (-)
dytn NA coding upstream 141123 20965938 ~ 21075255 (-)
ftcd ftcd coding upstream 166075 20990890 ~ 21003269 (-)
LOC120554641 LOC103473932 coding upstream 302079 21126894 ~ 21149363 (-)
LOC120554016 NA coding upstream 827151 21651966 ~ 21691088 (-)
G236569 NA non-coding downstream 20086 20801362 ~ 20801648 (-)
G236353 NA non-coding downstream 52569 20768705 ~ 20769165 (-)
G236350 NA non-coding downstream 59623 20761902 ~ 20762111 (-)
LOC120554725 NA non-coding downstream 67198 20753350 ~ 20754536 (-)
G236347 NA non-coding downstream 68711 20752609 ~ 20753023 (-)
LOC120554363 NA non-coding upstream 19 20824834 ~ 20838767 (-)
G236644 NA non-coding upstream 5542 20830357 ~ 20830736 (-)
G236560 NA non-coding upstream 14797 20839612 ~ 20841745 (-)
G236558 NA non-coding upstream 20836 20845651 ~ 20886276 (-)
G236610 NA non-coding upstream 34839 20859654 ~ 20918008 (-)
G236349 NA other downstream 60742 20760708 ~ 20760992 (-)
G236340 NA other downstream 93307 20726403 ~ 20728427 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other downstream 453301 20367341 ~ 20368433 (-)
G236111 sts,LOC108241831 other downstream 1089197 19731319 ~ 19732537 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 1292492 19523504 ~ 19529242 (-)
rgn LOC103371141 other upstream 18677 20843492 ~ 20853383 (-)
G236646 NA other upstream 37865 20862680 ~ 20863311 (-)
LOC120554644 NA other upstream 68099 20892914 ~ 20920498 (-)
arl11 NA other upstream 116173 20940988 ~ 20951865 (-)
LOC120554013 LOC103366577 other upstream 376181 21200996 ~ 21242177 (-)

Expression


Co-expression Network