LOC120554383


Basic Information

Item Value
gene id LOC120554383
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 19577088 ~ 19579375 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638391.1
CCGCAGTCCCACTGGCGAGAGTGGACCTCGAACTCCCTGACGATGCTCCGGTAAAGAACAAAGAGACGTTGGGACGTAGCTTCTCCAGAGTCGTGGTGCGCTGGGTCCGGGCAAAACACCAATTAGACTCGGCCGGTTTCCATCTCGCGTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638391.1 True 154 lncRNA 0.58 2 19577088 19579375

Neighbor

gene id symbol gene type direction distance location
acvr2ab acvr2a,LOC102784913,LOC103371821 coding downstream 1054072 18465948 ~ 18523016 (-)
LOC120554003 LOC103370269 coding downstream 1174875 18357104 ~ 18402213 (-)
LOC120554329 LOC100698054,LOC102783597 coding downstream 1223745 18342713 ~ 18353343 (-)
LOC120554384 NA coding downstream 1236669 18328508 ~ 18340419 (-)
LOC120554369 LOC104960229 coding downstream 1307419 18262836 ~ 18269669 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding upstream 29247 19608622 ~ 19621651 (-)
aox6 NA coding upstream 42727 19622102 ~ 19654312 (-)
pnpla4 pnpla4 coding upstream 169696 19749071 ~ 19755969 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding upstream 796218 20375593 ~ 20380492 (-)
LOC120554635 LOC104961873,LOC103363323 coding upstream 863606 20442981 ~ 20456063 (-)
G236018 NA non-coding downstream 11652 19565117 ~ 19565436 (-)
G236017 NA non-coding downstream 12907 19562871 ~ 19564181 (-)
LOC120554578 NA non-coding downstream 29612 19532876 ~ 19547476 (-)
G235978 NA non-coding downstream 73689 19503164 ~ 19503399 (-)
LOC120554031 NA non-coding downstream 203511 19371461 ~ 19373577 (-)
G236032 NA non-coding upstream 4818 19584193 ~ 19586723 (-)
G236015 NA non-coding upstream 28254 19607629 ~ 19608353 (-)
G236053 NA non-coding upstream 54003 19633378 ~ 19633959 (-)
G236054 NA non-coding upstream 54729 19634104 ~ 19634355 (-)
G236055 NA non-coding upstream 55355 19634730 ~ 19635006 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 47846 19523504 ~ 19529242 (-)
LOC120554371 mbd5,LOC102784158 other downstream 1137670 18404226 ~ 18439418 (-)
LOC120554370 LOC103370263 other downstream 1249985 18271078 ~ 18327103 (-)
s100b LOC103360204,LOC104927403 other downstream 1831831 17734731 ~ 17745257 (-)
G235350 NA other downstream 2473571 17064302 ~ 17103517 (-)
G236111 sts,LOC108241831 other upstream 151944 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 787966 20367341 ~ 20368433 (-)
G236340 NA other upstream 1147028 20726403 ~ 20728427 (-)
G236349 NA other upstream 1181333 20760708 ~ 20760992 (-)
rgn LOC103371141 other upstream 1264117 20843492 ~ 20853383 (-)

Expression


Co-expression Network