LOC120554613


Basic Information

Item Value
gene id LOC120554613
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 18256943 ~ 18257506 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638536.1
TCCAAGATGGACGCTACCGTCGAACTTATCGGCAGCAATGACccaaaaatgtataaattatgGACATGAAGTGGATAAATCTGGGATGTAaaagtttggatttattgctcaACGACCCCGAAAAAAAGGCACAACTTCCAGGCTGTATAGAAAACCTGTAAAGGCTAGAAAGACACCACAGACACCACCGAGACGGCCGGATTGTTAGCTCTTTTCGctataaaatgattaaaatgtgtgtCGCGGGGGGGTCACGACGTGCTGGTTCGTGCTCACCTGGCGCTGAGGCCGACGGCGTCACCATGGTGACGGTTCACCTGCGGTTCCTCATGAATATTCTTCTGTCAAATCTTCAATAAATTCTGACTGTCAAAGTCCATAAAGTC

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638536.1 True 386 lncRNA 0.46 2 18256943 18257506

Neighbor

gene id symbol gene type direction distance location
LOC120554053 mpp4 coding downstream 70366 18177570 ~ 18186577 (-)
LOC120554723 NA coding downstream 80235 18159816 ~ 18176708 (-)
LOC120554721 LOC104966233,LOC100698939 coding downstream 98643 18143977 ~ 18158300 (-)
abi2b abi2 coding downstream 113490 18113995 ~ 18143453 (-)
LOC120554632 LOC103360035,LOC103370267 coding downstream 154912 18029836 ~ 18102031 (-)
LOC120554369 LOC104960229 coding upstream 5330 18262836 ~ 18269669 (-)
LOC120554384 NA coding upstream 71002 18328508 ~ 18340419 (-)
LOC120554329 LOC100698054,LOC102783597 coding upstream 85207 18342713 ~ 18353343 (-)
LOC120554003 LOC103370269 coding upstream 99598 18357104 ~ 18402213 (-)
acvr2ab acvr2a,LOC102784913,LOC103371821 coding upstream 208442 18465948 ~ 18523016 (-)
G235816 NA non-coding downstream 42775 18210503 ~ 18214168 (-)
G235793 NA non-coding downstream 142986 18062294 ~ 18113957 (-)
G235743 NA non-coding downstream 270765 17985922 ~ 17986178 (-)
G235725 NA non-coding downstream 313446 17943210 ~ 17943497 (-)
G235724 NA non-coding downstream 316616 17934775 ~ 17940327 (-)
G235908 NA non-coding upstream 275941 18533447 ~ 18534684 (-)
G235929 NA non-coding upstream 339493 18596999 ~ 18597208 (-)
G235930 NA non-coding upstream 490924 18748430 ~ 18748645 (-)
G235931 NA non-coding upstream 529863 18787369 ~ 18787622 (-)
G235933 NA non-coding upstream 636401 18893907 ~ 18894507 (-)
s100b LOC103360204,LOC104927403 other downstream 511686 17734731 ~ 17745257 (-)
G235350 NA other downstream 1153426 17064302 ~ 17103517 (-)
trnat-cgu_19 NA other downstream 1500878 16755993 ~ 16756065 (-)
LOC120554263 NA other downstream 1514655 16736186 ~ 16742288 (-)
G235387 NA other downstream 1640627 16611983 ~ 16616316 (-)
LOC120554370 LOC103370263 other upstream 13572 18271078 ~ 18327103 (-)
LOC120554371 mbd5,LOC102784158 other upstream 146720 18404226 ~ 18439418 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other upstream 1265998 19523504 ~ 19529242 (-)
G236111 sts,LOC108241831 other upstream 1473813 19731319 ~ 19732537 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other upstream 2109835 20367341 ~ 20368433 (-)

Expression


Co-expression Network