Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120554667 |
| gene name | LOC108242155 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053135.1 |
| NCBI id | CM020932.1 |
| chromosome length | 21835524 |
| location | 20920580 ~ 20927156 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| PREDICTED: protein NLRC3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005638545.1 | True | 298 | lncRNA | 0.54 | 4 | 20920580 | 20927156 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vps16 | vps16 | coding | downstream | 52780 | 20853565 ~ 20867800 (-) |
| LOC120554361 | NA | coding | downstream | 118310 | 20794346 ~ 20802270 (-) |
| LOC120554635 | LOC104961873,LOC103363323 | coding | downstream | 464517 | 20442981 ~ 20456063 (-) |
| dhrsx | dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 | coding | downstream | 540088 | 20375593 ~ 20380492 (-) |
| pnpla4 | pnpla4 | coding | downstream | 1164611 | 19749071 ~ 19755969 (-) |
| dytn | NA | coding | upstream | 38782 | 20965938 ~ 21075255 (-) |
| ftcd | ftcd | coding | upstream | 63734 | 20990890 ~ 21003269 (-) |
| LOC120554641 | LOC103473932 | coding | upstream | 199738 | 21126894 ~ 21149363 (-) |
| LOC120554016 | NA | coding | upstream | 724810 | 21651966 ~ 21691088 (-) |
| LOC120554648 | NA | coding | upstream | 773549 | 21700705 ~ 21725016 (-) |
| G236610 | NA | non-coding | downstream | 2572 | 20859654 ~ 20918008 (-) |
| G236649 | NA | non-coding | downstream | 24448 | 20894240 ~ 20896132 (-) |
| G236558 | NA | non-coding | downstream | 34304 | 20845651 ~ 20886276 (-) |
| G236559 | NA | non-coding | downstream | 38399 | 20880919 ~ 20882181 (-) |
| G236607 | NA | non-coding | downstream | 46376 | 20871127 ~ 20874204 (-) |
| G236624 | NA | non-coding | upstream | 31158 | 20958314 ~ 20988474 (-) |
| G236659 | NA | non-coding | upstream | 61362 | 20988518 ~ 20989800 (-) |
| G236662 | NA | non-coding | upstream | 102781 | 21029937 ~ 21030262 (-) |
| G236673 | NA | non-coding | upstream | 124351 | 21051507 ~ 21052073 (-) |
| G236572 | NA | non-coding | upstream | 142160 | 21069316 ~ 21077796 (-) |
| LOC120554644 | NA | other | downstream | 82 | 20892914 ~ 20920498 (-) |
| G236646 | NA | other | downstream | 57269 | 20862680 ~ 20863311 (-) |
| rgn | LOC103371141 | other | downstream | 67197 | 20843492 ~ 20853383 (-) |
| G236349 | NA | other | downstream | 159588 | 20760708 ~ 20760992 (-) |
| G236340 | NA | other | downstream | 192153 | 20726403 ~ 20728427 (-) |
| arl11 | NA | other | upstream | 13832 | 20940988 ~ 20951865 (-) |
| LOC120554013 | LOC103366577 | other | upstream | 273840 | 21200996 ~ 21242177 (-) |
| LOC120554014 | NA | other | upstream | 373125 | 21300281 ~ 21557021 (-) |
| LOC120554015 | NA | other | upstream | 707692 | 21634848 ~ 21651918 (-) |
| G236611 | NA | other | upstream | 746536 | 21673692 ~ 21674838 (-) |
