LOC120554669 (LOC108250351,LOC103477372)


Basic Information

Item Value
gene id LOC120554669
gene name LOC108250351,LOC103477372
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 21355047 ~ 21357342 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638548.1
TATCAGAGAgtagctgtgaagctctgtcctcagttctcagctcccagtcctctagtctgagagagctggacctgagtaacaacaacctgcggGATTCAGGAGGGAAACTGATCTCTGTTGgcctgaagagtccacactgcacactggagactctcagtctgtcaggctgtctgatctcagaggaaggctgttcttctctggtctcagctctgagctccaacccctcccatctgagagagctggacctgagctacaatcacccaggagactcaggagtgaagctactCTCAGCGGGACTGGAGGATCctctctggagactggacactctcagggtggagcctgctggagtcagatggttgacaccgggtctgaggaagtgtaagtgTGTATTTAATTTTGttcatcaaactgtgacatAATTCATTCAAACCTCTGAAGTTATCATGACTGGACCATGGTCACCCTCTGCCTTTACCGTAATATTACATCTATAACAACCGCGTTCCCAACTTTACCTGGAGCTCACAAACCGaaagtctgtttctctcttccgTTGTCTGTCACAGCCTaacgtttaactgacattatTCAACCTTAGCACTTGTTTTAGCAGACCTCTATTACTTCAGTTAACTTTAACCAGCCTGCTtctttctgaaaaacaacaacatcaaaaagaaacaGCCTAACTAAACATGCTTGCTTACTGGGAGTTCTGGATAAACTCACGGAAGACATTACCGTCGCTGGCTGTGtggtgaagcaaatctaccagccacttgcatattttaccagcagaAGGTGTTAACTTTGGACCCTGATTCAAGCCAATCAGCAACAGGCAGCAGCAGTTGATGGTGGGGAGGCAGCGTGTGAAAGTGCCGGCCAGCCAGTACATATCTTTCCATGAATCTGGGGGCAGAGCTTCTGAAGGGGGTTGTAGCTGTTTGCCAGTTGaattcaaatatcaataatcTTTGCGCAACAttgcttactgcacctttaataacTGCAGCTCCGGGGctccctggtagctcacctggttgagtgtTTGCCTAAtatacaaaccccaattccaaaaAGATGGCGGAGTGAAGAGATGGCACGCTGAGACGCCGCGCTGAGGCCAAAACCCCCTCTTTAAAGGTTATTTTTCCAACTTAATCTGTaatttttacataaatataagAAACTGGAATAGTTCGCAAGAGACAATTGAAAGTTTGGAGTCTTACATCGACGCAAATTACGACGAAATGGCAAAACCGGGAGCAAGCGTGGAAGAAGCGAACTGGGCTCAAGTGGCACAGAGGACTGTTTGCTTACCACAGAAATGCAAAGTATTAAAAAGCTTTGGACGGCATGAACAGCAAGCTTCAAAAGCTGGACATGCTAAATCAACTCTCTGAAGATGTGAAAGACATGAAGCATTCACTGGAGTTCTATATAGAATTGGTCGACGTCCTCAAACAAGAGAGTGCGTCGCTGAGATTAGAGGTTAAAAATCTCAAACAACTGACCACTGAACTCTAAGGAAACAATaccaaaatgtcagaaaacattTTGGATTTACAGATCCGGAGTATGCAAGATCATATAATAATCCATGGTGTGCACGAGACAGCAAAGGAAACTTACCAAGTCACAGAGAAGCTGGTAAAAAGTTAATGACGGAGCAGCTAAAAATGGATCAATCCGTGGTGCAGAACATTCAGCTTGCTAGAGTGCACCGGATCGGGAAACCCAAAGTAGCAAGGGACAAACACAAACCCATCGTGGCAAAACTTGCTGTGTCGAAGGACAAATCCACTATTATGGCAAGAGGTCGGGAACTGAAAGGATCAACTTTCTCCATCACAGAGCAGTTCCCTCCG

Function

NR:

description
PREDICTED: NACHT, LRR and PYD domains-containing protein 14-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638548.1 True 1874 lncRNA 0.46 3 21355047 21357342

Neighbor

gene id symbol gene type direction distance location
LOC120554641 LOC103473932 coding downstream 205684 21126894 ~ 21149363 (-)
dytn NA coding downstream 279792 20965938 ~ 21075255 (-)
ftcd ftcd coding downstream 351778 20990890 ~ 21003269 (-)
vps16 vps16 coding downstream 487247 20853565 ~ 20867800 (-)
LOC120554361 NA coding downstream 552777 20794346 ~ 20802270 (-)
LOC120554016 NA coding upstream 294624 21651966 ~ 21691088 (-)
LOC120554648 NA coding upstream 343363 21700705 ~ 21725016 (-)
G236628 NA non-coding downstream 9864 21344701 ~ 21345183 (-)
LOC120554668 NA non-coding downstream 29549 21324435 ~ 21325498 (-)
G236692 NA non-coding downstream 107971 21193592 ~ 21247076 (-)
G236711 NA non-coding upstream 15772 21373114 ~ 21373378 (-)
G236618 NA non-coding upstream 18095 21375437 ~ 21381005 (-)
G236712 NA non-coding upstream 18783 21376125 ~ 21376884 (-)
G236713 NA non-coding upstream 20037 21377379 ~ 21378004 (-)
G236721 NA non-coding upstream 60754 21418096 ~ 21420001 (-)
LOC120554013 LOC103366577 other downstream 112870 21200996 ~ 21242177 (-)
arl11 NA other downstream 403182 20940988 ~ 20951865 (-)
LOC120554644 NA other downstream 434549 20892914 ~ 20920498 (-)
G236646 NA other downstream 491736 20862680 ~ 20863311 (-)
rgn LOC103371141 other downstream 501664 20843492 ~ 20853383 (-)
LOC120554015 NA other upstream 277506 21634848 ~ 21651918 (-)
G236611 NA other upstream 316350 21673692 ~ 21674838 (-)

Expression


Co-expression Network