LOC120554725


Basic Information

Item Value
gene id LOC120554725
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 20753350 ~ 20754536 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005638571.1
ACACTCACTTAGCAGAGGAGAGCGACGGAGAGGAGACAGCACTTTGGAGCTGGGAGTTTGATCTGGATTTTAGAGTAAAGAGTGAGATATTGAAAGAGGATGGAGAGGGCTGGGGCGTCAACCCAAAAGCCCAGAGCGATCAGGCAAGGACACAAATGTCCAATATGTGGGCTGGAGTACGCAGACTTAATGCAGCACCTTAAACTAGGTGAACGTGTGGTCAACAGAACAGAACTGGACCTGCTATCTAAGCTGGCACACAGACATTTCACGGCGAGCTTGGATTGCCCGGTACGTAACTGCAACTCCAGGAAGATGAACAGGCTGGACAAGCACCTTCTAAAAGTGCACAAACTGGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005638571.1 True 360 lncRNA 0.50 3 20753350 20754536

Neighbor

gene id symbol gene type direction distance location
LOC120554635 LOC104961873,LOC103363323 coding downstream 297287 20442981 ~ 20456063 (-)
dhrsx dhrsx,LOC104961879,LOC108244136,LOC106908010,LOC106908011 coding downstream 372858 20375593 ~ 20380492 (-)
pnpla4 pnpla4 coding downstream 997381 19749071 ~ 19755969 (-)
aox6 NA coding downstream 1099038 19622102 ~ 19654312 (-)
bzw1a LOC107384676,LOC108245120,LOC107082828,LOC103371116,LOC101480137,LOC103457358 coding downstream 1131699 19608622 ~ 19621651 (-)
LOC120554361 NA coding upstream 39810 20794346 ~ 20802270 (-)
vps16 vps16 coding upstream 99029 20853565 ~ 20867800 (-)
dytn NA coding upstream 211402 20965938 ~ 21075255 (-)
ftcd ftcd coding upstream 236354 20990890 ~ 21003269 (-)
LOC120554641 LOC103473932 coding upstream 372358 21126894 ~ 21149363 (-)
G236347 NA non-coding downstream 327 20752609 ~ 20753023 (-)
G236335 NA non-coding downstream 76049 20677054 ~ 20677301 (-)
G236326 runx1,LOC104961881 non-coding downstream 117471 20633878 ~ 20635879 (-)
G236311 NA non-coding downstream 197367 20555715 ~ 20555983 (-)
G236310 NA non-coding downstream 212651 20540455 ~ 20540699 (-)
G236350 NA non-coding upstream 7366 20761902 ~ 20762111 (-)
G236353 NA non-coding upstream 14169 20768705 ~ 20769165 (-)
G236569 NA non-coding upstream 46826 20801362 ~ 20801648 (-)
LOC120554364 LOC100693318,LOC101465085,LOC102292591 non-coding upstream 67198 20821734 ~ 20824815 (-)
LOC120554363 NA non-coding upstream 70298 20824834 ~ 20838767 (-)
G236340 NA other downstream 24923 20726403 ~ 20728427 (-)
G236277 adarb1,adarb1b,LOC105907970,LOC107754003 other downstream 384917 20367341 ~ 20368433 (-)
G236111 sts,LOC108241831 other downstream 1020813 19731319 ~ 19732537 (-)
LOC120554050 f2,LOC106587117,LOC106561958,LOC100136077,LOC101463683,LOC102200345,LOC102207201 other downstream 1224108 19523504 ~ 19529242 (-)
LOC120554371 mbd5,LOC102784158 other downstream 2313932 18404226 ~ 18439418 (-)
G236349 NA other upstream 6172 20760708 ~ 20760992 (-)
rgn LOC103371141 other upstream 88956 20843492 ~ 20853383 (-)
G236646 NA other upstream 108144 20862680 ~ 20863311 (-)
LOC120554644 NA other upstream 138378 20892914 ~ 20920498 (-)
arl11 NA other upstream 186452 20940988 ~ 20951865 (-)

Expression


Co-expression Network