trnad-guc_30


Basic Information

Item Value
gene id trnad-guc_30
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 13056616 ~ 13056687 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1567
TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGACGGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1567 True 72 tRNA 0.61 1 13056616 13056687

Neighbor

gene id symbol gene type direction distance location
zgc:65895 tsc22d1,LOC106531085,LOC102196627,LOC106942021,LOC103477739,LOC103130603 coding downstream 8020 13021048 ~ 13048596 (-)
mtrf1 mtrf1,LOC104961503 coding downstream 60621 12992838 ~ 12995995 (-)
trnae-uuc_66 NA coding downstream 70728 12985817 ~ 12985888 (-)
gk LOC100693874,LOC101471943 coding downstream 72041 12961875 ~ 12984575 (-)
LOC120554795 NA coding downstream 97053 12954106 ~ 12959563 (-)
trnag-gcc_27 NA coding upstream 55471 13112158 ~ 13112228 (-)
LOC120554566 NA coding upstream 649563 13706250 ~ 13711834 (-)
hecw2b hecw2 coding upstream 740745 13797432 ~ 14008423 (-)
LOC120554288 NA coding upstream 923364 13980051 ~ 13981370 (-)
gtf3c3 gtf3c3 coding upstream 953578 14010265 ~ 14087482 (-)
G234434 NA non-coding downstream 65178 12988373 ~ 12991438 (-)
G234375 NA non-coding downstream 270673 12783991 ~ 12785943 (-)
G234373 NA non-coding downstream 276456 12779586 ~ 12780160 (-)
G234333 NA non-coding downstream 567608 12487905 ~ 12489008 (-)
G234330 NA non-coding downstream 569286 12436996 ~ 12487330 (-)
G234478 NA non-coding upstream 105045 13161732 ~ 13162096 (-)
G234490 NA non-coding upstream 143291 13199978 ~ 13200294 (-)
G234491 NA non-coding upstream 146235 13202922 ~ 13205960 (-)
G234523 NA non-coding upstream 374294 13430981 ~ 13439811 (-)
G234526 dmd non-coding upstream 430280 13486967 ~ 13497867 (-)
G234405 NA other downstream 102491 12953090 ~ 12954125 (-)
G234253 LOC103139183,LOC106940425,LOC106914874 other downstream 763473 12278519 ~ 12293143 (-)
igfbp5a igfbp5,LOC103371819,LOC104928322,LOC101465019 other downstream 1518295 11524382 ~ 11538321 (-)
LOC120554153 LOC101072154,LOC104957764,LOC103371815,LOC107377212,LOC108242182 other downstream 1567139 11458937 ~ 11489477 (-)
spega LOC103358966 other downstream 1614690 11388552 ~ 11441926 (-)
arhgap1 arhgap1,LOC101474800,LOC102196105 other upstream 1137625 14194312 ~ 14290043 (-)
G234898 NA other upstream 1791147 14847834 ~ 14849737 (-)
LOC120554377 LOC103355861 other upstream 1909629 14966316 ~ 15013814 (-)
LOC120554197 LOC107380983,LOC108241855,LOC108242155,LOC102792843,LOC102297898,LOC102783771 other upstream 3192007 16248694 ~ 16288150 (-)
LOC120554218 NA other upstream 3269406 16326093 ~ 16352877 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnad-guc-396 NA coding NW_023494072.1 JAAXML020000604.1 65221 ~ 65292 (-)