trnas-uga_30


Basic Information

Item Value
gene id trnas-uga_30
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 15945793 ~ 15945874 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1599
GCTGTgatggccgagtggttaaggcgttGGACTTGAAATCCAATGGGGTTTCCCCGCGCAGGTTCAAACCCTGCTCACAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1599 True 82 tRNA 0.57 1 15945793 15945874

Neighbor

gene id symbol gene type direction distance location
trnas-uga_29 NA coding upstream 2389 15943323 ~ 15943404 (+)
trnas-uga_28 NA coding upstream 4850 15940863 ~ 15940943 (+)
trnas-uga_27 NA coding upstream 7327 15938385 ~ 15938466 (+)
trnas-uga_26 NA coding upstream 12077 15933635 ~ 15933716 (+)
trnas-uga_25 NA coding upstream 14889 15930823 ~ 15930904 (+)
trnas-uga_31 NA coding downstream 2385 15948259 ~ 15948340 (+)
trnas-uga_32 NA coding downstream 4851 15950725 ~ 15950806 (+)
LOC120554249 NA coding downstream 39560 15985434 ~ 15992736 (+)
LOC120553995 NA coding downstream 54416 16000290 ~ 16033713 (+)
trnak-cuu_19 NA coding downstream 97140 16043014 ~ 16043085 (+)
G235152 NA non-coding upstream 61783 15883763 ~ 15884010 (+)
LOC120554272 NA non-coding upstream 262303 15676977 ~ 15683490 (+)
G235074 NA non-coding upstream 278437 15666872 ~ 15667356 (+)
G235056 NA non-coding upstream 331240 15614216 ~ 15614553 (+)
LOC120554283 NA non-coding upstream 379230 15563750 ~ 15566563 (+)
LOC120554276 NA non-coding downstream 179587 16125461 ~ 16126791 (+)
G235185 NA non-coding downstream 249688 16195562 ~ 16195700 (+)
G235216 NA non-coding downstream 275546 16221420 ~ 16222735 (+)
G235243 NA non-coding downstream 376967 16322841 ~ 16324248 (+)
trnat-agu_42 NA non-coding downstream 560747 16506621 ~ 16506694 (+)
LOC120554227 NA other upstream 903349 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 1035718 14806527 ~ 14910075 (+)
G234651 NA other upstream 1800923 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 2742981 13169370 ~ 13202812 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other upstream 2920273 13002963 ~ 13025520 (+)
LOC120554234 NA other downstream 442823 16388697 ~ 16612671 (+)
trnat-cgu_20 NA other downstream 810691 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 814484 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 815625 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 816662 16762536 ~ 16762608 (+)

Expression


Co-expression Network