trnat-agu_43


Basic Information

Item Value
gene id trnat-agu_43
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16507893 ~ 16507966 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1650
GGTGCTGTGGATTAGTTGGTGAAAGTGCCTGTCTAGTAAACAGGAgatcctgggttcaaatcccagcagcACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1650 True 74 tRNA 0.50 1 16507893 16507966

Neighbor

gene id symbol gene type direction distance location
trnas-uga_33 NA coding upstream 5740 16502072 ~ 16502153 (+)
LOC120554222 NA coding upstream 6608 16494132 ~ 16501285 (+)
trnat-ugu_42 NA coding upstream 283066 16224755 ~ 16224827 (+)
LOC120554255 NA coding upstream 287207 16201422 ~ 16220686 (+)
LOC120553997 NA coding upstream 313041 16183840 ~ 16194852 (+)
trnak-cuu_44 NA coding downstream 114717 16622683 ~ 16622755 (+)
trnat-agu_53 NA coding downstream 115037 16623003 ~ 16623076 (+)
LOC120554238 NA coding downstream 135676 16643642 ~ 16658812 (+)
LOC120554253 dhrsx,LOC104961879 coding downstream 151837 16659803 ~ 16674690 (+)
LOC120554242 NA coding downstream 173062 16681028 ~ 16683511 (+)
trnak-cuu_34 NA non-coding upstream 252 16507569 ~ 16507641 (+)
trnat-agu_42 NA non-coding upstream 1199 16506621 ~ 16506694 (+)
G235243 NA non-coding upstream 183645 16322841 ~ 16324248 (+)
G235216 NA non-coding upstream 285158 16221420 ~ 16222735 (+)
G235185 NA non-coding upstream 312193 16195562 ~ 16195700 (+)
trnak-cuu_35 NA non-coding downstream 875 16508841 ~ 16508913 (+)
trnat-agu_44 NA non-coding downstream 1199 16509165 ~ 16509238 (+)
trnak-cuu_36 NA non-coding downstream 3824 16511790 ~ 16511862 (+)
trnat-agu_45 NA non-coding downstream 4140 16512106 ~ 16512179 (+)
trnak-cuu_37 NA non-coding downstream 5093 16513059 ~ 16513132 (+)
LOC120554227 NA other upstream 1465449 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 1597818 14806527 ~ 14910075 (+)
G234651 NA other upstream 2363023 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 3305081 13169370 ~ 13202812 (+)
G234425 tsc22d1,LOC106531085,LOC102196627 other upstream 3482373 13002963 ~ 13025520 (+)
trnat-cgu_20 NA other downstream 248599 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 252392 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 253533 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 254570 16762536 ~ 16762608 (+)
LOC120554243 NA other downstream 372673 16880639 ~ 16932606 (+)

Expression


Co-expression Network