trnat-agu_53


Basic Information

Item Value
gene id trnat-agu_53
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16623003 ~ 16623076 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1670
GGTGCTGTGGCTTAGTTGGTGAAAGTGCCTGTCTAGTAAACAGGAgatcctgggttcaaatcccagcagcACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1670 True 74 tRNA 0.51 1 16623003 16623076

Neighbor

gene id symbol gene type direction distance location
trnak-cuu_44 NA coding upstream 248 16622683 ~ 16622755 (+)
trnas-uga_33 NA coding upstream 120850 16502072 ~ 16502153 (+)
LOC120554222 NA coding upstream 121718 16494132 ~ 16501285 (+)
trnat-ugu_42 NA coding upstream 398176 16224755 ~ 16224827 (+)
LOC120554255 NA coding upstream 402317 16201422 ~ 16220686 (+)
LOC120554238 NA coding downstream 20566 16643642 ~ 16658812 (+)
LOC120554253 dhrsx,LOC104961879 coding downstream 36727 16659803 ~ 16674690 (+)
LOC120554242 NA coding downstream 57952 16681028 ~ 16683511 (+)
trnat-agu_54 NA coding downstream 73971 16697047 ~ 16697120 (+)
trnat-cgu_17 NA coding downstream 74793 16697869 ~ 16697941 (+)
G235284 NA non-coding upstream 28154 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 56959 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 99691 16523239 ~ 16523312 (+)
trnak-cuu_43 NA non-coding upstream 100005 16522926 ~ 16522998 (+)
trnat-agu_51 NA non-coding upstream 102608 16520322 ~ 16520395 (+)
G235321 NA non-coding downstream 217110 16840186 ~ 16840829 (+)
G235332 NA non-coding downstream 311723 16934799 ~ 16935666 (+)
LOC120554286 NA non-coding downstream 510040 17133116 ~ 17146492 (+)
LOC120554285 NA non-coding downstream 560279 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 689933 17313009 ~ 17313865 (+)
LOC120554234 NA other upstream 10332 16388697 ~ 16612671 (+)
LOC120554227 NA other upstream 1580559 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 1712928 14806527 ~ 14910075 (+)
G234651 NA other upstream 2478133 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 3420191 13169370 ~ 13202812 (+)
trnat-cgu_20 NA other downstream 133489 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 137282 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 138423 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 139460 16762536 ~ 16762608 (+)
LOC120554243 NA other downstream 257563 16880639 ~ 16932606 (+)

Expression


Co-expression Network