trnat-cgu_17


Basic Information

Item Value
gene id trnat-cgu_17
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16697869 ~ 16697941 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1672
GGCGCTGTAGCTTAGAGGTTAAAGTGCCTGTCTCGTAAACAGGAgatcctgggttcaaatcccagcagtgcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1672 True 73 tRNA 0.52 1 16697869 16697941

Neighbor

gene id symbol gene type direction distance location
trnat-agu_54 NA coding upstream 749 16697047 ~ 16697120 (+)
LOC120554242 NA coding upstream 14358 16681028 ~ 16683511 (+)
LOC120554253 dhrsx,LOC104961879 coding upstream 23179 16659803 ~ 16674690 (+)
LOC120554238 NA coding upstream 39057 16643642 ~ 16658812 (+)
trnat-agu_53 NA coding upstream 74793 16623003 ~ 16623076 (+)
trnat-cgu_18 NA coding downstream 31677 16729618 ~ 16729690 (+)
LOC120554241 NA coding downstream 36720 16734661 ~ 16751516 (+)
LOC120554340 NA coding downstream 82063 16780004 ~ 16782236 (+)
trnat-agu_57 NA coding downstream 86897 16784838 ~ 16784911 (+)
trnat-ugu_44 NA coding downstream 87473 16785414 ~ 16785486 (+)
G235284 NA non-coding upstream 103020 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 131825 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 174557 16523239 ~ 16523312 (+)
trnak-cuu_43 NA non-coding upstream 174871 16522926 ~ 16522998 (+)
trnat-agu_51 NA non-coding upstream 177474 16520322 ~ 16520395 (+)
G235321 NA non-coding downstream 142245 16840186 ~ 16840829 (+)
G235332 NA non-coding downstream 236858 16934799 ~ 16935666 (+)
LOC120554286 NA non-coding downstream 435175 17133116 ~ 17146492 (+)
LOC120554285 NA non-coding downstream 485414 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 615068 17313009 ~ 17313865 (+)
LOC120554234 NA other upstream 85198 16388697 ~ 16612671 (+)
LOC120554227 NA other upstream 1655425 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 1787794 14806527 ~ 14910075 (+)
G234651 NA other upstream 2552999 14115859 ~ 14144870 (+)
LOC120554638 tmem47,LOC104936888,LOC106530717,LOC102201289 other upstream 3495057 13169370 ~ 13202812 (+)
trnat-cgu_20 NA other downstream 58624 16756565 ~ 16756637 (+)
trnat-ugu_43 NA other downstream 62417 16760358 ~ 16760430 (+)
trnat-agu_56 NA other downstream 63558 16761499 ~ 16761572 (+)
trnat-cgu_21 NA other downstream 64595 16762536 ~ 16762608 (+)
LOC120554243 NA other downstream 182698 16880639 ~ 16932606 (+)

Expression


Co-expression Network