trnat-agu_56


Basic Information

Item Value
gene id trnat-agu_56
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16761499 ~ 16761572 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1678
ggtgctgtggcttAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCCTGGGTTAAAATCCCAGCAGCACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1678 True 74 tRNA 0.50 1 16761499 16761572

Neighbor

gene id symbol gene type direction distance location
LOC120554241 NA coding upstream 9983 16734661 ~ 16751516 (+)
trnat-cgu_18 NA coding upstream 31809 16729618 ~ 16729690 (+)
trnat-cgu_17 NA coding upstream 63558 16697869 ~ 16697941 (+)
trnat-agu_54 NA coding upstream 64379 16697047 ~ 16697120 (+)
LOC120554242 NA coding upstream 77988 16681028 ~ 16683511 (+)
LOC120554340 NA coding downstream 18432 16780004 ~ 16782236 (+)
trnat-agu_57 NA coding downstream 23266 16784838 ~ 16784911 (+)
trnat-ugu_44 NA coding downstream 23842 16785414 ~ 16785486 (+)
trnat-agu_58 NA coding downstream 24436 16786008 ~ 16786081 (+)
trnat-agu_59 NA coding downstream 57032 16818604 ~ 16818677 (+)
G235284 NA non-coding upstream 166650 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 195455 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 238187 16523239 ~ 16523312 (+)
trnak-cuu_43 NA non-coding upstream 238501 16522926 ~ 16522998 (+)
trnat-agu_51 NA non-coding upstream 241104 16520322 ~ 16520395 (+)
G235321 NA non-coding downstream 78614 16840186 ~ 16840829 (+)
G235332 NA non-coding downstream 173227 16934799 ~ 16935666 (+)
LOC120554286 NA non-coding downstream 371544 17133116 ~ 17146492 (+)
LOC120554285 NA non-coding downstream 421783 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 551437 17313009 ~ 17313865 (+)
trnat-ugu_43 NA other upstream 1069 16760358 ~ 16760430 (+)
trnat-cgu_20 NA other upstream 4862 16756565 ~ 16756637 (+)
LOC120554234 NA other upstream 148828 16388697 ~ 16612671 (+)
LOC120554227 NA other upstream 1719055 15028838 ~ 15042444 (+)
LOC120554715 LOC103355859,LOC104964875 other upstream 1851424 14806527 ~ 14910075 (+)
trnat-cgu_21 NA other downstream 964 16762536 ~ 16762608 (+)
LOC120554243 NA other downstream 119067 16880639 ~ 16932606 (+)
trnat-agu_63 NA other downstream 188849 16950421 ~ 16950494 (+)
trnat-cgu_25 NA other downstream 190125 16951697 ~ 16951769 (+)
als2b NA other downstream 1120893 17882465 ~ 17938311 (+)

Expression


Co-expression Network