trnat-agu_57


Basic Information

Item Value
gene id trnat-agu_57
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 16784838 ~ 16784911 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1680
GGTGCTGTGGCTTAGTTGGTTAAAGTGCCTGTCTAGTAATCAGGAGATCCTGGGTTCAAGTCCCAGCAGCACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1680 True 74 tRNA 0.50 1 16784838 16784911

Neighbor

gene id symbol gene type direction distance location
LOC120554340 NA coding upstream 2602 16780004 ~ 16782236 (+)
LOC120554241 NA coding upstream 33322 16734661 ~ 16751516 (+)
trnat-cgu_18 NA coding upstream 55148 16729618 ~ 16729690 (+)
trnat-cgu_17 NA coding upstream 86897 16697869 ~ 16697941 (+)
trnat-agu_54 NA coding upstream 87718 16697047 ~ 16697120 (+)
trnat-ugu_44 NA coding downstream 503 16785414 ~ 16785486 (+)
trnat-agu_58 NA coding downstream 1097 16786008 ~ 16786081 (+)
trnat-agu_59 NA coding downstream 33693 16818604 ~ 16818677 (+)
LOC120554204 NA coding downstream 196126 16981037 ~ 17000130 (+)
trnat-agu_64 NA coding downstream 244078 17028989 ~ 17029062 (+)
G235284 NA non-coding upstream 189989 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 218794 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 261526 16523239 ~ 16523312 (+)
trnak-cuu_43 NA non-coding upstream 261840 16522926 ~ 16522998 (+)
trnat-agu_51 NA non-coding upstream 264443 16520322 ~ 16520395 (+)
G235321 NA non-coding downstream 55275 16840186 ~ 16840829 (+)
G235332 NA non-coding downstream 149888 16934799 ~ 16935666 (+)
LOC120554286 NA non-coding downstream 348205 17133116 ~ 17146492 (+)
LOC120554285 NA non-coding downstream 398444 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 528098 17313009 ~ 17313865 (+)
trnat-cgu_21 NA other upstream 22230 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 23266 16761499 ~ 16761572 (+)
trnat-ugu_43 NA other upstream 24408 16760358 ~ 16760430 (+)
trnat-cgu_20 NA other upstream 28201 16756565 ~ 16756637 (+)
LOC120554234 NA other upstream 172167 16388697 ~ 16612671 (+)
LOC120554243 NA other downstream 95728 16880639 ~ 16932606 (+)
trnat-agu_63 NA other downstream 165510 16950421 ~ 16950494 (+)
trnat-cgu_25 NA other downstream 166786 16951697 ~ 16951769 (+)
als2b NA other downstream 1097554 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 1168228 17953139 ~ 17966226 (+)

Expression


Co-expression Network