trnat-cgu_28


Basic Information

Item Value
gene id trnat-cgu_28
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053135.1
NCBI id CM020932.1
chromosome length 21835524
location 17073653 ~ 17073725 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1699
GGCGCTGTAGCTTAGTGGTTAAAGCGCCTGTCTCGTAAACAGGAgatcctgggttcaaatcccagcagTGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1699 True 73 tRNA 0.53 1 17073653 17073725

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_47 NA coding upstream 533 17073048 ~ 17073120 (+)
trnat-cgu_27 NA coding upstream 18275 17055306 ~ 17055378 (+)
trnat-agu_65 NA coding upstream 18884 17054696 ~ 17054769 (+)
trnat-ugu_46 NA coding upstream 21047 17052534 ~ 17052606 (+)
trnat-cgu_26 NA coding upstream 44209 17029372 ~ 17029444 (+)
trnat-cgu_29 NA coding downstream 286 17074011 ~ 17074083 (+)
trnat-agu_66 NA coding downstream 30843 17104568 ~ 17104641 (+)
trnat-cgu_30 NA coding downstream 31416 17105141 ~ 17105213 (+)
LOC120554254 NA coding downstream 39691 17113416 ~ 17124906 (+)
LOC120553999 NA coding downstream 95660 17169385 ~ 17178813 (+)
G235332 NA non-coding upstream 137987 16934799 ~ 16935666 (+)
G235321 NA non-coding upstream 232824 16840186 ~ 16840829 (+)
G235284 NA non-coding upstream 478804 16594198 ~ 16594849 (+)
LOC120554281 NA non-coding upstream 507609 16563427 ~ 16566044 (+)
trnat-agu_52 NA non-coding upstream 550341 16523239 ~ 16523312 (+)
LOC120554286 NA non-coding downstream 59391 17133116 ~ 17146492 (+)
LOC120554285 NA non-coding downstream 109630 17183355 ~ 17204668 (+)
G235497 NA non-coding downstream 239284 17313009 ~ 17313865 (+)
G235501 NA non-coding downstream 271740 17345465 ~ 17345923 (+)
G235530 NA non-coding downstream 276140 17349865 ~ 17350086 (+)
trnat-cgu_25 NA other upstream 121884 16951697 ~ 16951769 (+)
trnat-agu_63 NA other upstream 123159 16950421 ~ 16950494 (+)
LOC120554243 NA other upstream 141047 16880639 ~ 16932606 (+)
trnat-cgu_21 NA other upstream 311045 16762536 ~ 16762608 (+)
trnat-agu_56 NA other upstream 312081 16761499 ~ 16761572 (+)
als2b NA other downstream 808740 17882465 ~ 17938311 (+)
LOC120554216 mpp4 other downstream 879414 17953139 ~ 17966226 (+)
G235775 NA other downstream 1093561 18167286 ~ 18171954 (+)
G235778 NA other downstream 1103100 18176825 ~ 18181812 (+)
anos1a LOC103358938 other downstream 2598147 19671872 ~ 19698895 (+)

Expression


Co-expression Network