LOC120555119


Basic Information

Item Value
gene id LOC120555119
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 26383 ~ 112045 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU322763
GCTCaatgactttgtatcactgtggtacACGTTCGGTGGAGGAACCAGACTCAATGTTGGAAGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGATGAGCTGCTGAAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGCTCTCAGAGACTCTGAGGAGAGACCAGTGTGACTGATCTcagtctgctctctctctctctctctctctctctctctctctctctctctctctctctctctcactgtctaaTTACATGTTTCATTGATAGTTGTGTAGCTTGTTGTActtttgatgatgtcatcacaatAAATCCCTTTTCATCAAATCAGTTGTTTTCATGTCTGTTATTGTAAAAGAAACCGCAGACAGGGCTCACCCAGTTCTCATGGAATATTTGACCTTTTAAGCCGACGTGGACAAGAAGTCTCACACAAATGCT
>TU322767
aaactcctctcctctatcaacatccgtccctctgaaatgaagccgactaaaccgtgacgctgctttatgtttttgtctctgtatcctcagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGATGTTCATGGTGGGAGCTATCTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTTTCATGTTATCAACAGCCAgtatgtgttGACTTTTggtggaggaaccagactgaatgttggaaGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGATGAGCTGCTGAAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGCTCTCAGAGACTCTGAGGAGAGACCAGTGTGACTGATCTcagtctgctctctctctctctctctctctctctctctctctctctctctctctctctctctcactgtctaaTTACATGTTTCATTGATAGTTGTGTAGCTTGTTGTActtttgatgatgtcatcacaatAAATCCCTTTTCATCAAATCAGTTGTTTTCATGTCTGTTATTGTAAAAGAAACCGCAGACAGGGCTCACCCAGTTCTCATGGAATATTTGACCTTTTAAGCCGACGTGGACAAGAAGTCTCACACAAATGCT
>TU322768
cagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGAATATTCCTAATTACCAGTGTTTAGCctggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTATCATGCTATCAACAGTCAGCgtgtgttGACTTTTggtggaggaaccagactgaatgttggaaGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGATGAGCTGCTGAAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGCTCTCAGAGACTCTGAGGAGAGACCAGTGTGACTGATCTcagtctgctctctctctctctctctctctctctctctctctctctctctctctctctctctcactgtctaaTTACATGTTTCATTGATAGTTGTGTAGCTTGTTGTActtttgatgatgtcatcacaatAAATCCCTTTTCATCAAATCAGTTGTTTTCATGTCTGTTATTGTAAAAGAAACCGCAGACAGGGCTCACCCAGTTCTCATGGAATATTTGACCTTTTAAGCCGACGTGGACAAGAAGTCTCACACAAATGCT
>TU322769
aaactcctctcctctatcaacatccgtccctctgaaatgaagccgactaaaccgtgacgctgctttatgtttttgtctctgtatcctcagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGATGTTCATGGTGGGAGCTATCTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTTTCATGTTATCAACAGCCAgtatgtgtgGACTTTTggtggaggaaccagactgaATGTTGGAAGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGATGAGCTGCTGAAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGCTCTCAGAGACTCTGAGGAGAGACCAGTGTGACTGATCTcagtctgctctctctctctctctctctctctctctctctctctctctctctctctctctctcactgtctaaTTACATGTTTCATTGATAGTTGTGTAGCTTGTTGTActtttgatgatgtcatcacaatAAATCCCTTTTCATCAAATCAGTTGTTTTCATGTCTGTTATTGTAAAAGAAACCGCAGACAGGGCTCACCCAGTTCTCATGGAATATTTGACCTTTTAAGCCGACGTGGACAAGAAGTCTCACACAAATGCT
>TU322770
aaactcctctcctctatcaacatccgtccctctgaaatgaagccgactaaaccgtgacgctgctttatgtttttgtctctgtatcctcagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGATGTTCATGGTGGGAGCTATCTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTTTCATGTTATCAACAGCCAgtatgtgtacACGTTCggtggaggaaccagactgaATGTTAACT
>unassigned_transcript_1706
atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGATGTTCATGGTGGGAGCTATCTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTTTCATGTTATCAACAGCCAgtatgtgtgGACTTTTggtggagGAACCAGACTCAATGTTGGAAGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGATGAGCTGCTGAAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGCTCTCAGAGACTCTGAGGAGAGACCAGTGTGACTGATCTcagtctgctctctctctctctctctctctctctctctctctctctctctctctctctctctcactgtctaaTTACATGTTTCATTGATAGTTGTGTAGCTTGTTGTActtttgatgatgtcatcacaatAAATCCCTTTTCATCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322763 False 649 TUCP 0.53 3 77093 112045
TU322767 True 1025 TUCP 0.51 3 26452 112045
TU322768 False 938 TUCP 0.51 3 34629 112045
TU322769 False 1025 TUCP 0.51 3 26452 112045
TU322770 False 438 lncRNA 0.48 2 26452 77154
unassigned_transcript_1706 False 873 V_gene_segment 0.53 5 26383 111931

Neighbor

gene id symbol gene type direction distance location
LOC120555132 NA non-coding upstream 15194 10675 ~ 11189 (+)
G237627 NA non-coding downstream 11077 123122 ~ 139332 (+)
G237622 NA non-coding downstream 12277 124322 ~ 139761 (+)
G237626 NA non-coding downstream 31450 143495 ~ 215838 (+)
G237641 NA non-coding downstream 131529 243574 ~ 249263 (+)
LOC120555100 NA non-coding downstream 162832 274877 ~ 275367 (+)
LOC120555134 NA other downstream 33962 146007 ~ 146527 (+)
G237621 vpreb3 other downstream 41434 153479 ~ 668474 (+)
LOC120555157 NA other downstream 57355 169400 ~ 169894 (+)
LOC120555149 NA other downstream 66334 178379 ~ 178996 (+)
LOC120555145 NA other downstream 75711 187756 ~ 188498 (+)

Expression


Co-expression Network