LOC120555106


Basic Information

Item Value
gene id LOC120555106
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 376531 ~ 379047 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU322895
GGCTCCTTGTTCAGGGTTCATCAGGAGAAATCATCCTGACTCAGTCTCCTGGATCTCAGTCTGTTGCTCCAGGACAGTCTGTCTCTATCAGATGTAAAGCTAGTTCAAGTGTTACCAATGACTTGCAGTGGTACCTTCACAAACCTGGAGAATCTCCCAAACTCTTGATTTATAATGCTCAATCCCGTCAGTCTGGAGTTTCAGATAGTTTCAGTGGGACTCAGTCTGGaactgacttcactctgaccatcagtggagttcAGACTGAAGATGGAGGAGATTATtattgtcagcaggattacagc
>unassigned_transcript_1744
ATGGATCTAGtcagctggaaaactgtccgactgtCCACCCTGGGGCTCCTTGTTCAGGGTTCATCAGGAGAAATCATCCTGACTCAGTCTCCTGGATCTCAGTCTGTTGCTCCAGGACAGTCTGTCTCTATCAGATGTAAAGCTAGTTCAAGTGTTACCAATGACTTGCAGTGGTACCTTCACAAACCTGGAGAATCTCCCAAACTCTTGATTTATAATGCTCAATCCCGTCAGTCTGGAGTTTCAGATAGTTTCAGTGGGACTCAGTCTGGaactgacttcactctgaccatcagtggagttcAGACTGAAGATGGAGGAGATTATtattgtcagcaggattacagcTACCCGTTCACACAGTGATACAacgtcgtacaaaaacctcctcaGCTGGAGAGGAACTGATCTGAATGAACAGCTGCAGAAACCTACAGAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU322895 False 305 lncRNA 0.45 2 378434 378954
unassigned_transcript_1744 True 441 V_gene_segment 0.46 3 376531 379047

Neighbor

gene id symbol gene type direction distance location
LOC120555123 NA non-coding upstream 8699 367324 ~ 367832 (+)
LOC120555138 NA non-coding upstream 12168 363742 ~ 364363 (+)
LOC120555104 NA non-coding upstream 21862 354197 ~ 354669 (+)
LOC120555103 NA non-coding upstream 29763 346296 ~ 346768 (+)
LOC120555114 NA non-coding upstream 44861 331189 ~ 331670 (+)
G237631 NA non-coding downstream 14908 393955 ~ 394462 (+)
G237637 NA non-coding downstream 40850 419897 ~ 420275 (+)
G237696 NA non-coding downstream 63821 442868 ~ 448687 (+)
G237697 NA non-coding downstream 121580 500627 ~ 559660 (+)
LOC120555180 NA non-coding downstream 132965 512012 ~ 536359 (+)
G237624 NA other upstream 59752 262995 ~ 316779 (+)
LOC120555159 NA other upstream 106048 269925 ~ 270483 (+)
LOC120555155 NA other upstream 110043 265822 ~ 266488 (+)
LOC120555148 NA other upstream 119419 256482 ~ 257112 (+)
LOC120555099 NA other upstream 127455 248595 ~ 249076 (+)
LOC120555107 NA other downstream 10713 389760 ~ 390250 (+)
LOC120555108 NA other downstream 29045 408092 ~ 408573 (+)
LOC120555110 NA other downstream 45345 424392 ~ 424873 (+)
LOC120555146 NA other downstream 71974 451021 ~ 451936 (+)
LOC120555140 NA other downstream 103188 482235 ~ 482862 (+)

Expression


Co-expression Network