LOC120555132


Basic Information

Item Value
gene id LOC120555132
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 10675 ~ 11189 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1705
atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtacGACCAGTCAGGATATTCCTTCTTACCACTATTTAGCctggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTGGCATTACATCAACAGTCAGGatgtgttcacacagtgaaaaagcgtcgtacaaaaacctccctcagtcaga

Function

GO: NA

KEGG:

id description
ko04662 B cell receptor signaling pathway
ko04664 Fc epsilon RI signaling pathway
ko05150 Staphylococcus aureus infection
ko05310 Asthma
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1705 True 408 V_gene_segment 0.49 2 10675 11189

Neighbor

gene id symbol gene type direction distance location
G237623 NA non-coding downstream 3558 14747 ~ 484541 (+)
G237672 NA non-coding downstream 26547 37736 ~ 118498 (+)
G237674 NA non-coding downstream 86053 97242 ~ 109670 (+)
LOC120555179 NA non-coding downstream 96901 108090 ~ 108490 (+)
G237627 NA non-coding downstream 111933 123122 ~ 139332 (+)
LOC120555119 NA other downstream 15194 26383 ~ 112045 (+)
G237658 NA other downstream 35532 46721 ~ 52213 (+)
LOC120555134 NA other downstream 134818 146007 ~ 146527 (+)
G237621 vpreb3 other downstream 142290 153479 ~ 668474 (+)
LOC120555157 NA other downstream 158211 169400 ~ 169894 (+)

Expression


Co-expression Network