LOC120555093


Basic Information

Item Value
gene id LOC120555093
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 206378 ~ 206859 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1716
atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGAGGGTTTATGGTGGGAGCTATCTGCActggtaccaacagagagatggagaaactcctAAACTGCTCATTTATGGTGCTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtGCACATTACATCAACAGCCAgtatgtgttcacacagtga

Function

GO:

id name namespace
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1716 True 375 V_gene_segment 0.50 2 206378 206859

Neighbor

gene id symbol gene type direction distance location
G237622 NA non-coding upstream 66617 124322 ~ 139761 (+)
G237627 NA non-coding upstream 67046 123122 ~ 139332 (+)
G237672 NA non-coding upstream 87880 37736 ~ 118498 (+)
G237674 NA non-coding upstream 96708 97242 ~ 109670 (+)
LOC120555179 NA non-coding upstream 97888 108090 ~ 108490 (+)
G237641 NA non-coding downstream 36715 243574 ~ 249263 (+)
LOC120555100 NA non-coding downstream 68018 274877 ~ 275367 (+)
LOC120555152 NA non-coding downstream 71309 278168 ~ 278818 (+)
LOC120555136 NA non-coding downstream 75645 282504 ~ 283027 (+)
LOC120555133 NA non-coding downstream 90997 297856 ~ 298370 (+)
LOC120555127 NA other upstream 13084 192781 ~ 193294 (+)
LOC120555145 NA other upstream 17880 187756 ~ 188498 (+)
LOC120555149 NA other upstream 27382 178379 ~ 178996 (+)
LOC120555157 NA other upstream 36484 169400 ~ 169894 (+)
LOC120555134 NA other upstream 59851 146007 ~ 146527 (+)
LOC120555095 NA other downstream 6721 213580 ~ 214067 (+)
LOC120555096 NA other downstream 11932 218791 ~ 219263 (+)
LOC120555097 NA other downstream 18625 225484 ~ 225956 (+)
LOC120555122 NA other downstream 28564 235423 ~ 235948 (+)
LOC120555143 NA other downstream 36555 243414 ~ 243926 (+)

Expression


Co-expression Network