LOC120555148


Basic Information

Item Value
gene id LOC120555148
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 256482 ~ 257112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1724
GTGTTGATCAGTGACTGTCCAGGACTTTCAGAGCCACTGACACGCGGGCagcatgatgatgatgtcactgatTCTACTGCTGGCCACCCTGGGGCTCCTTGTTCAGGGTTCATCAGGAGAAATCATCCTGACTCAGTCTCCTGGATCTCAGTCTGTTGCTCCAGGACAGTCTGTCTCTATCAGATGTAAAGCCAGTTCTAGTGCTGGTACTTACCTAAACTGGTACCTTCAAAAACCTGGAGAATCTCCTAAACTTTTGATTTATCGTGCTACAAGCCTTCAGACTGGAGTTTCAGGCCGTTTCAGTGGAAGTGGATCTGGaactgacttcactctgaccatcagtggagttcAGACTGAAGATGCAGGAGATTATTATTGTCAGCAGAGTAACAGCTTCCCGTTCACACAGTGA

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04145 Phagosome
ko04662 B cell receptor signaling pathway
ko04664 Fc epsilon RI signaling pathway
ko05150 Staphylococcus aureus infection
ko05140 Leishmaniasis
ko05310 Asthma
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1724 True 415 V_gene_segment 0.48 2 256482 257112

Neighbor

gene id symbol gene type direction distance location
G237641 NA non-coding upstream 7219 243574 ~ 249263 (+)
G237626 NA non-coding upstream 40644 143495 ~ 215838 (+)
G237622 NA non-coding upstream 116721 124322 ~ 139761 (+)
G237627 NA non-coding upstream 117150 123122 ~ 139332 (+)
G237672 NA non-coding upstream 137984 37736 ~ 118498 (+)
LOC120555100 NA non-coding downstream 17765 274877 ~ 275367 (+)
LOC120555152 NA non-coding downstream 21056 278168 ~ 278818 (+)
LOC120555136 NA non-coding downstream 25392 282504 ~ 283027 (+)
LOC120555133 NA non-coding downstream 40744 297856 ~ 298370 (+)
LOC120555130 NA non-coding downstream 48626 305738 ~ 306219 (+)
LOC120555099 NA other upstream 7406 248595 ~ 249076 (+)
LOC120555143 NA other upstream 12556 243414 ~ 243926 (+)
LOC120555122 NA other upstream 20534 235423 ~ 235948 (+)
LOC120555097 NA other upstream 30526 225484 ~ 225956 (+)
LOC120555096 NA other upstream 37219 218791 ~ 219263 (+)
G237624 NA other downstream 5883 262995 ~ 316779 (+)
LOC120555155 NA other downstream 8710 265822 ~ 266488 (+)
LOC120555159 NA other downstream 12813 269925 ~ 270483 (+)
LOC120555106 NA other downstream 119419 376531 ~ 379047 (+)
LOC120555107 NA other downstream 132648 389760 ~ 390250 (+)

Expression


Co-expression Network