LOC120555161


Basic Information

Item Value
gene id LOC120555161
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 344138 ~ 345592 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1738
gtttttgtacggcggctcaatgactttgtatcactgtggtacACGTTCggtggaggaaccagactgaATGTTGGAAGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGATGAGTTGATCCAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTAAAGACCAGTGGGAGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCActctcagagacactgaggagagaCCAGTGTTCCCAGTCCTGACCTGACTCACTGGGACTCTGCTACTGGTTTCACTCTGATACTGATCTCAGTCTGCTCTctgctactctctctctctctctctctctctctctctctctctctctctctctctctctctgtttatctcTTTCCCTCACTCACTGTCTGATTACATGTTTCATTGATAAagtgtgttgcatgttttaattttcattattttaacacAATAAAGTACTTTTCATCAAA

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1738 True 630 C_gene_segment 0.53 2 344138 345592

Neighbor

gene id symbol gene type direction distance location
LOC120555165 NA non-coding downstream 23447 318931 ~ 320691 (-)
G237746 NA non-coding downstream 56402 248799 ~ 287736 (-)
G237728 NA non-coding downstream 68596 183399 ~ 275542 (-)
LOC120555178 NA non-coding downstream 72504 271233 ~ 271634 (-)
G237737 NA non-coding downstream 190026 32771 ~ 154112 (-)
LOC120555105 NA non-coding upstream 19807 365399 ~ 365881 (-)
G237722 NA non-coding upstream 44109 389701 ~ 438619 (-)
G237755 NA non-coding upstream 116981 462573 ~ 559468 (-)
LOC120555167 NA non-coding upstream 168711 514303 ~ 514663 (-)
G237721 NA non-coding upstream 188776 534368 ~ 659595 (-)
LOC120555170 NA other downstream 74962 267675 ~ 269176 (-)
LOC120555164 NA other downstream 81905 258458 ~ 262233 (-)
LOC120555098 NA other downstream 97423 245310 ~ 246715 (-)
LOC120555168 NA other downstream 153202 189604 ~ 190936 (-)
LOC120555177 NA other downstream 163496 180132 ~ 180642 (-)
LOC120555169 NA other upstream 46085 391677 ~ 393137 (-)
LOC120555171 NA other upstream 60307 405899 ~ 407410 (-)
LOC120555176 NA other upstream 118710 464302 ~ 464806 (-)
LOC120555144 NA other upstream 291357 636949 ~ 637585 (-)
G237726 LOC101484247 other upstream 299443 645035 ~ 645620 (-)

Expression


Co-expression Network