LOC120555104


Basic Information

Item Value
gene id LOC120555104
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 354197 ~ 354669 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1740
atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagaggccaggtcacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCGGAATCCTGACTATTTACActggtaccaacagagagatggagaaactcctAAACTGCTCATTTATAGTACTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtGCACATTACATCAACAGCCAGTGGGTGTTGACACAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1740 True 366 V_gene_segment 0.50 2 354197 354669

Neighbor

gene id symbol gene type direction distance location
LOC120555103 NA non-coding upstream 7429 346296 ~ 346768 (+)
LOC120555114 NA non-coding upstream 22527 331189 ~ 331670 (+)
LOC120555153 LOC101488087 non-coding upstream 26563 326926 ~ 327634 (+)
LOC120555126 NA non-coding upstream 31083 316222 ~ 323114 (+)
LOC120555130 NA non-coding upstream 47978 305738 ~ 306219 (+)
LOC120555138 NA non-coding downstream 9073 363742 ~ 364363 (+)
LOC120555123 NA non-coding downstream 12655 367324 ~ 367832 (+)
G237631 NA non-coding downstream 39286 393955 ~ 394462 (+)
G237637 NA non-coding downstream 65228 419897 ~ 420275 (+)
G237696 NA non-coding downstream 88199 442868 ~ 448687 (+)
G237624 NA other upstream 37418 262995 ~ 316779 (+)
LOC120555159 NA other upstream 83714 269925 ~ 270483 (+)
LOC120555155 NA other upstream 87709 265822 ~ 266488 (+)
LOC120555148 NA other upstream 97085 256482 ~ 257112 (+)
LOC120555099 NA other upstream 105121 248595 ~ 249076 (+)
LOC120555106 NA other downstream 21862 376531 ~ 379047 (+)
LOC120555107 NA other downstream 35091 389760 ~ 390250 (+)
LOC120555108 NA other downstream 53423 408092 ~ 408573 (+)
LOC120555110 NA other downstream 69723 424392 ~ 424873 (+)
LOC120555146 NA other downstream 96352 451021 ~ 451936 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) LOC122332362 NA misc NW_025047689.1 JAEQBD010000034.1 349334 ~ 349912 (-)