LOC120555160



Basic Information


Item Value
gene id LOC120555160
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 534212 ~ 534716 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>unassigned_transcript_1755
atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagagtccagcGGTCAGTacacagtgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGAATGTTTATGTTTCTAACAGGTTAGCctggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATGCTACTACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTAACACTATCCCAACAGTCAGTGGGTGTTgacacagtgaaaaagcgtcgtacaaaaacctcc

Function


GO: NA

KEGG:

id description
ko05330 Allograft rejection
ko05340 Primary immunodeficiency

RNA


RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1755 True 398 V_gene_segment 0.48 2 534212 534716

Neighbor


gene id symbol gene type direction distance location
LOC120555141 LOC101484247 non-coding upstream 21325 512218 ~ 512887 (+)
G237623 NA non-coding upstream 49671 14747 ~ 484541 (+)
G237696 NA non-coding upstream 85525 442868 ~ 448687 (+)
G237637 NA non-coding upstream 113937 419897 ~ 420275 (+)
G237631 NA non-coding upstream 139750 393955 ~ 394462 (+)
LOC120555128 NA non-coding downstream 2859 537575 ~ 538487 (+)
G237629 NA non-coding downstream 8035 542751 ~ 589126 (+)
LOC120555117 NA non-coding downstream 28137 562853 ~ 636019 (+)
G237643 NA non-coding downstream 59828 594544 ~ 616711 (+)
G237702 NA non-coding downstream 61040 595756 ~ 648909 (+)
LOC120555140 NA other upstream 51350 482235 ~ 482862 (+)
LOC120555146 NA other upstream 82276 451021 ~ 451936 (+)
LOC120555110 NA other upstream 109339 424392 ~ 424873 (+)
LOC120555108 NA other upstream 125639 408092 ~ 408573 (+)
LOC120555107 NA other upstream 143962 389760 ~ 390250 (+)
LOC120555115 NA other downstream 75215 609931 ~ 643704 (+)

Expression



Co-expression Network