LOC120555117


Basic Information

Item Value
gene id LOC120555117
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_024375613.1
NCBI id VHII01000026.1
chromosome length 686707
location 562853 ~ 636019 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1757
atgactttgatctccgtcctcatctggactctcctctgctgctgcttcacagAGTCCAGCGGTCAGTACACActgactcagcctggagcagtgagctctgctctgggaggctccgtctccatcagctgtaggaccagTCAGGATGTTTATTATGATGGAAACCACAGGTTAGCctggtaccaacagagagatggagaaactcctAAACTGCTCATTTACTATGCTAGCACTCGACAATCAGGGATTCCAGatcgttttacaggcagtggatcaaactctgacttcactctgaccatcagtggagtccagactgaagatgcagcagtttactactgtcagagtTTTCACTATCCCAACAGTCAgtatgtgttcACGTTCggtggaggaaccagactgGAATTTGGAAGTGATGTCCGTCCCACCCTGACGGTGCTGCCCCCCTCCAGTGAGGAGCTGCTGCAGGGGAAGGCCACGCTCATGTGCCTGGCCAACAAGGGCTTCCCCTCAGACTGGAGTCTGGCCTGGAAGGtggacggcagcagcagcagcagctgggaggagagcaggagcCCCGGGGTGCTGGGGAAGGACGGCAAATACAGCTGGAGCAGCACCCTGAGGCTCCCTGGAGACCAGTGGGTGAAGGTGGGCTCTGTGACCTGTGAGGCCACCCAGGGCTCCCAGACTCCGctctcagagacactgaggagagaCCAGTGTTCCCAGTCCTGACCTGACTCATTGGGACTCTGCTACTGGTTTCACTCTGATACTGATCTCAGTCTGCAACTCTCTCTATCTGTTTATCGCTTTCTCTCACTCACTGTCTGATTACATGTTTCATTGATAAAGTCTGTTCcatgttttaattttgattattttaacaCAATAAAGTACTTTTCATCAAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1757 True 911 V_gene_segment 0.52 4 562853 636019

Neighbor

gene id symbol gene type direction distance location
G237697 NA non-coding upstream 3193 500627 ~ 559660 (+)
LOC120555128 NA non-coding upstream 24366 537575 ~ 538487 (+)
LOC120555180 NA non-coding upstream 26494 512012 ~ 536359 (+)
LOC120555160 NA non-coding upstream 28137 534212 ~ 534716 (+)
LOC120555141 LOC101484247 non-coding upstream 49966 512218 ~ 512887 (+)
LOC120555140 NA other upstream 79991 482235 ~ 482862 (+)
LOC120555146 NA other upstream 110917 451021 ~ 451936 (+)
LOC120555110 NA other upstream 137980 424392 ~ 424873 (+)
LOC120555108 NA other upstream 154280 408092 ~ 408573 (+)
LOC120555107 NA other upstream 172603 389760 ~ 390250 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) LOC122329703 igiv1s4 coding NC_056722.1 CM032091.1 3579777 ~ 3580390 (+)