XLOC_005058 (si:dkey-275b16.2)


Basic Information

Item Value
gene id XLOC_005058
gene name si:dkey-275b16.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 1338341 ~ 1345562 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009854
GCGTCGAGTTGAAGACTAAACGTTTCTTTCAGTCCTCCATGTCTGTATCCTGAACGAATGGATTCAATGGCTCAGCGTCCAGACCGTGATTCTCAGATATTTATAATAGGATGCGGCATCTCAGGAATCGGTGCTGCTCAGAAATTAATCAAACACGGTTTTCATAATGTACGCATTATAGAAGCAACTGCAAGAAGCGGTGGGAGAATACGAACGGGCAGACTGGgTGATAACATCATAGAGATCGGTGCCAACTGGATCCATGGCCCGTCGAAGGAAAACCCAGTGTTCCGTTTGGCATGTGACTATCAGCTCCTAGATAAAGAGTCGATGTCTGAAGAAAACCAGGCCATTGACATTGGGGGTCATCCTCTGTTTGTTCCCAACTGGTTTACCAGTTCAGGTCGGAAACTGGGGCCTGAGACTATGGGCCCAGCGCTTGAGTTTTTCATGACATTACTGGAAAGGAGCCAGCAGTTCCACAGCACCGGTGGAGAACCTCTGCCGAGTGTTGGAGAGTTCATCAAGGCAGAAGCTGAACGTCTGGCCCCAGAGGAGTGGAAGGAGGACAGAGATAACTTTGCAGTGAGGATGGCCATGATAAACACACTCCTCAAACTGGAGTGCTGTGTCAGCGGAACACACACCATGGATGATGTTGGTCTAGGAGCATTTGGCATGTATACAACTCTTCCAGGACTTGACTGCACTTTCCCAGGAGGTTATGAAGGTTTGACTGATCACATGATGAAGGAGCTTCCCCGAGACATAGTCTTATACAACAAGCCTGTAAAGTGCATTCACTGGAACTACACCAAGAATGGGCCCAACACTGGAGGAACGTCATTCCCAGTTACGATTGAATGTGTTAATGGAGAAACATTTGCAGCAGATCATGTTATTGTCACAGTTCCACTTGgatACATGAAGAAGCATCAGAACACTTTTCTGAGTCCTTCTTTTCCACTGCACAAACTACACTCCATTCAGAGAATGGGCTTTGGGACGAACAACAAGATCTTTGTTGAGTTTGAGCAGCCTTTCTGGGATGAAGACTGTGAACTTATTTACCTTGTATGGGAGGACGAGACCCATCTTACTGATGTTGTTTCTGATTTGAAGATGTCCTGGATTAGGAAGTTGACTGGGTTCACTGTGCTGAAGCCCACTGAAAGATTTGGACATGTGCTCTGTGGATGGATCGCAGGGCAGGAATCGGAGTACATGGAATCTCTGTCTGAACTAGAAGTGCTGCAGACTGTCACACAACTCCTTCGCATATTTACTgGAAATCCAACTATTATGCCAAGGAAGCTGTTACGATCTCAATGGTTCCATGAGCCCTATTCCTGTGGATCTTACTCCTACGTGGCCAAAGGTTGCTCAGGATATGACATCGATAACCTCGCTGAACCCTTGCCGTTGAAAGGCTCCAACTCAAAGCCTTTGCAGGTGTTATTTGCAGGAGAAGCTACACACAGGTCTTTCTTCTCTACGGTGCATGGAGCTTTACTCAGTGGCTGGAGAGAGGCAGAGCGTCTGATATCTCACCACACTTCTGCTTCTGGATCATTCTCATCTAAACTGTGAATGCTGTCCTCGTCTGGAAAGATTGCCCTTTTCATTGAAACTGAAAGGGTTTGTACCTTAAAATCGTCAGTAAAGGATTATCCGGATGTAATGAATGACTGCTTGGCAATTGTCCCAATGCCTTTGCAAAAATATAAGTGGGTATTTAAAAATTTCAGTAACGCTTTACACTGAAgttgcattagttaacatgaacaaacagtgcACGGCGATACAGCATATATTCAAATACAACAATGCTCATTTCATTGTTACTAATCATGGCCTAATCAAAAGTTGTAAATATACACAGGGCTTTTTCCTGGCTCAGAATAAAGCAGAGGGGTATCCTGATTGTGACATTTTTGCTACTTAAAACGAacacattttgcattattttaatattatcaagtaacattatcttattttaaaaagGCTAATGTTAAATGTAATGAAATACATGACCACTGCTTGAGCATCACTTGGGGACTGTTGGTAGCCATGACTTTCTGCctgatatattttatatagattaAAATGTTATCTATTTACAGTTGAGGTCAACATTATTAAACCCCTTGAATTATTATCGCCcctgttgatttatttttttcatcaagtttttgtttaatggagaaaagatttttttaacacatttctaaacataatagttctaataactcatttctaataactagtttctcttatctttgccatgatgacagtaaataatattttaataaatattttccaagacacttctatacagtacAAAGGGatattttaaggcttaactaggttaattaggttaactaggcaggatagggtaattaggcaagttattgtataatgatggtttgttctgtagactatcaaaaaatatatggcttaaaggggctaataattttgaccttaatgttttttttttttaataaaacaaataagactttctcctgtagaaaaaatatcagacatactgtgaaaattttcttgctcttaaaattcatttgggaaatatttaaaaaagaaagaagatttcaaagggcagctaataattctgatttcaactttatatattagttcatgttaacttttGCAACAAATGAGGCCTTATTTTTGTGTTACCAAATgctagttgttgtttctgtgatctgaaaataatttatatatattaaacatattttctc

Function

symbol description
si:dkey-275b16.2 Predicted to enable polyamine oxidase activity. Orthologous to human PAOX (polyamine oxidase).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0046592 polyamine oxidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090312-204 Predicted to enable polyamine oxidase activity. Orthologous to human PAOX (polyamine oxidase).

Ensembl:

ensembl_id ENSDARG00000109596

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009854 True 2756 mRNA 0.40 7 1338341 1345562

Neighbor

gene id symbol gene type direction distance location
XLOC_005057 NA coding downstream 253114 1072485 ~ 1085227 (-)
XLOC_005056 polr3e coding downstream 303881 1014418 ~ 1034460 (-)
XLOC_005055 mettl9 coding downstream 338541 992442 ~ 999800 (-)
XLOC_005054 kdelr2b coding downstream 348192 982796 ~ 990149 (-)
XLOC_005053 daglb coding downstream 358552 964760 ~ 979789 (-)
XLOC_005059 RASSF4 coding upstream 3856 1349418 ~ 1361517 (-)
XLOC_005060 LO018020.2 coding upstream 23083 1368645 ~ 1370372 (-)
XLOC_005061 MED9 coding upstream 58244 1403806 ~ 1406480 (-)
XLOC_005062 NA coding upstream 107338 1452900 ~ 1453339 (-)
XLOC_005063 CU694266.1 coding upstream 144910 1490472 ~ 1490588 (-)
XLOC_005043 NA non-coding downstream 929710 406187 ~ 408631 (-)
XLOC_005042 NA non-coding downstream 982786 337808 ~ 355555 (-)
XLOC_005037 NA non-coding downstream 1059006 250081 ~ 279335 (-)
XLOC_005038 NA non-coding downstream 1073140 262396 ~ 265201 (-)
XLOC_005067 NA non-coding upstream 654457 2000019 ~ 2001490 (-)
XLOC_005068 NA non-coding upstream 655074 2000636 ~ 2001824 (-)
XLOC_005069 NA non-coding upstream 722401 2067963 ~ 2479931 (-)

Expression


Co-expression Network