ntrk3b


Basic Information

Item Value
gene id ntrk3b
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 706157 ~ 921549 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU33473
TTATGAAGAAGATTGCTGCTACTCTCGTATCTGTCAGATCAATATGAAGCTATAGTCAGTAGGCGTTTAACTTAGCCTAGCATTAAAGACTGGACACATAGGCTGCTGGACGTAGCttagtatatactgtacagacacaagagtggtattgatctcgTCATCTAACTCAAATTTTTAGGTTAATACCATAAGGATCCTGTCACTTCACAAGCCGAAAAGGAGCACGATGGCTTTTCCCCCTCACATTCCATTcagaacaacacacaaaaaagcattttgtttttactgttcTGATTTCTTTTCCATCAACTGTACATGACTCACAGTCACTTTTTTCTTCCTCACACTCGTGGCCTTTGCATGTTTAGCAATGATGAGGTTTTGCACCCGTCTATTGCTTTGTTAAAAACCCCTTCTGCTACGACCAGAGAGGAGCCACTGAAGCAGGTACATCAGAAATAATAATCACTGAAGCAGATTAGCTAACTGTGTGGTATTGCGCGTTCCATATTTTTGATAATTAGTATTTAATGAACTGGAAAACATGAGTTTTGTTCCAAAATGTGGCAATTAACATGACCCCTAAAATGCataacagcaaaaaaaatgaaaaaaaatgaaaaccaaatGAAATTACTTTTAAAGACTCGTTCCTAATTAAGTGCTCGAAATGAGTTCATTTTTACTGAGTGAATTCTGTAGATTTCTTAGACACTGAATGATAAACCTCAGgcaacaattttattttatgttgtatCTGGATATATAGCGTTTTGGAGTGGAATTCTTCACATCTCTTCCTTATTATCCTGACATGACTTCTCACAATATCACAGTGTTGTCTCTGTTCCCCTTGGGACTATGTAAATCATTAATGAGCATTCAGTTATTTCAAGTATTTTATATGAAAGGCAGGATCAAATCCAACGAGTTACCCAAAGCATTGAGTTTTTGTGTATTCTCTTGTGGTAAAGATAAACGCTTAAAGACATTATGACACAGACCTTGAGCATTTGCAGGGTATTGTAATCCTTTCATGGTGAGTTGAATAttgtttaaaaagtaatttttttcttttcttggatGAACTAACTGAACACTTTTTGAAGCAAAGTTGGCATATT
>XM_039795075.1
CAGCCAGTCGTCCTGGTCCTGCTTGGAGAGAGACGACGGCATCAGCAGCAACAGCACGGCATTCCGGGGAAACACCATGCATCTTAGGCTGAAAAGACGACTGGAGCCAAACATCATTTCGCTTTCTTATATTTGATTTCCGTATATTTTTTCTTTCGTTTCGTCCTTTTTGTTTCTCCTTTTTTAGCCAATTTCTGACGCGCAAGGACACTACAGCATCCATCCACGGCAGACACGCTCACATAGAGCCTCCTCTGTGCAGACGCACCACCAtcctcctctttccttccttccttccttccttcctcccactctcctcctctcctctctcctgttcTGTTCTAACCCAGAGGACATCGGGACCTCTTCTCCCCCCGTTTGCCCGGAGACATGGATCTATGGTTTCATTCGATCCGGATTTGCTGGTGGAGGGTTTTGTTTCTGATGAGTGTTTTCCAGGACTATCTGAGCTCCATGCTGGACTGCCCGCCGACCTGCAGCTGCTCTCAAACAGAGATCTATTGCAATAAGTCCGATAACGGCAGGTTTTTCCCTTTACTCGCCCTGCAAGATACTGGGAGCAATGGGACCAGTGTTGACATAGCAGAGTTATTCAAAAACATCACCTCTATACACATAGAGAACTGGACGGGATTGCAGACTCTGAGAGATGTCGATATGGAGCTCTACACTGGACTACAGAGGCTAACTATCATGAATTGCAACCTGAGGGTGATCCAGGCTCGAGCGTTCGCTCAGAATCCACACATACGCTACATAAACTTGTCAAAGAATCCTCTCAGCACTTTGTCATGGCAGCTCTTCCAGCACCTCCAAATCTCCGAGCTGCGCCTGGAAGGCGTGGTGTTTGACTGCGGCTGTGATATCCGCTGGATCCAGCTGTggcagcagagaggagaggcCGGGCTCCACACACAGCAGCTGTACTGCAAGAACGGAGCCTCCAAGATACGACTGCACAACATGTACATCCACAACTGTGGTAAGAGGAGGAatagagggagaaagaggaTGGAGGGCGACAATGTGACCGTGAGCTGCAATGGATCTGGATCACCGCTGCCTGAAGTGGACTGGACTGTTAGCGGCCTGCACTCCATCAATACACACctgTCCAATGTATACTGGCCGAACATCCACTCTATCAACCTGACTCTTTTCAACATCAGCCGAGATGACAACAACTTCCAGCTGACCTGCATTGCAGAGAACGTGGTGGGGATGACAAACTCCTCCATCCAGCTCAACGTACAATTTCCTCCAGTCATCCTGAGACTGGCTGAGCCCGAGCAGCGCCATGATACCTGCATTGAGTTCACGGTTCGGGGTTACCCCCATCCCAAGCTGCGCTGGTTCTACAAGCAAAAGGAGATTCTCCAGAACGATTACATCCGAACTGACATGGACTTCTACCAGGACTATCTGGAGGGCTGTCTGACCTTCCAGAACCCAACACACATCAACAATGGCAACTACACTCTTGAGGCCAGCAACCCTTTGGGAACAGTCACCAAGACAGTGTATGGTCACTTCCTCATGGCCCCCGACATGGAAGAAAAGGACATAGTGGAACTAGttccttcgATGCCGTCAGATGGTGATTCAGGCCGACCAGATGAAGATACATTTGGGGTTTCCATCGCTGTGGGTTTGGCAGGCTTTGCTtgcgtcctcctcctcgtcctttTTGTTCTCATCAACAAATACGGCCGGCGCTCCAAATTCGGTATGAAAGGTCCTGTAGCTGTGATCAGTGGTGAGGAAGACTCTGCCAGCCCTCTTCATCATGTCAACCATGGGATTATTACCCCCTGTACTCTGGATGCGGGCCCTGATGCGGTTGTCATAGGGATGACTCGTATTCCTGTGGTGGAGAATCCTCAGTACTTTAGGCATGGACACAACTGCAACAAGCCAACCACCCTTGTCCAGCATATAAAGCGGAGAGACATCATCCTGAAGAGGGAGTTGGGTGAAGGAGCGTTCGGAAAAGTCTTCTTGGCAGAGTGCTACAACCTCAGCCCCACCAAGGACAAGATGCTGGTAGCTGTCAAGACACTGAAAGATCCCAACCTGTCGGCAAGAAAGGACTTCCAGAGGGAGGCAGAGCTGCTGACCAATCTGCAGCACGACCATATCGTTAAATTCTACGGAGTGTGTGTGGACGGAGACCCTCTCATCATGGTGTTCGAATACATGAAGCATGGAGACCTCAACAAATTCCTCAGAGCCCACGGCCCAGACGCCATGATCCTGGTAGATGGCCAGCCGCTGCAGTCTAACGGAGAGCTGGGCCTTTCCCAGATGCTGCACATCGCCACGCAGATTGCCTCGGGCATGGTCTACCTGGGCTCCCAGCACTTCGTCCACAGAGATCTTGCAACCCGTAATTGTCTGGTGGGCAATGGCCTGTTGGTTAAGATTGGAGACTTTGGCATGTCCAGGGACATCTACAGCAGTGACTACTACAGGGTTGGAGGACATACCATGCTACCTATTCGCTGGATGCCCCCAGAGAGCATCATGTACAGGAAATTCTCCACGGAAAGCGATGTCTGGAGCTTTGGAGTCATTTTGTGGGAGATCTTTACCTATGGGAAGCAGCCTTGGTTTCAGCTGGGCAACAACGAGGTTATTGAGTGCATAACCCAGGGTCGGGTTCTGGAGAGGCCACGGATCTGTCCTAAGGAGGTATATGACATCATGTTGGGCTGCTGGCAGAGGGAACCGCAGCAGCGACTGAACATTAAGGACATTCAGAAGGTCTTGTTCGCCATGGGGAAAGCCACGCCGGTCTACCTGGACATCCTGGGCTAGCAGTGGCCCGGGGTGGCCTGTTCTtcaccagacagacagaacgaCAGAGACTTACAGACAGACCAACCCACACCAATCCAGGAATAACCAAACCAACCTACTCCACTGTCGAAAAACACCTACAATGTTTGGGAAGGACTTAAGTGCCTGCAACACTTTTGGATATAGTGGATAAAACGTATTCAAAAAACAcgcacttttacattttgtttactTGCGTATAAGATGTACAGGTTTGAAgaagactcttttttttttctcgaaaaactgcaaaaatacacagaaatggATACAAAGTAAAGTGGACTGGCAAAAGGAAAATGGCcacagttatattatggagagAATACATCAGAGTTAAAATCTATCCTGGGTTTGGTTTTATGaatatatatagaaatattacatatattttatatttatttctttttgtcagGGTGTTAAAGGGTCTGCCATGTGTGTTGCTAAGGGCTCGGCCCTGTCCGAAGACGTCACCGACAAACTATTGGCAGGGACTTGACGATGGTAGCCTTACTTGCACTCTGACTGGCTGGCACGGAGCTTTTAATGGGAACTCTGATGAAAAAAAGGAGCGTGCTGTAGAGGAACTACCCAATCAAatctattttaatttaaaaaataatgtacatattGTAAAATTCTATGTGTCAAAATTATGTTAACTTATTTTTTCGGTGTTATTTTGGTTCCTTTTCTGACTGTGATCTGGGTGGCTAAAGTATAAAGCTATGGTATTTGTTTTCATCCTAATCTAGAGGAGATTTATCTTGGGAATTACCTGTGTCAGTGATGGTAGGTTGTCTTATGTGGTGAAGGCGAATGGCAATGAATACAGTTTGAAAAGTCAGCTGACACCGAATCACAGAGACTCTGGAGAATGGGGGGACGACTCGCAGCCATCAACGACACTTTTCCAAAGAGGTGATGAAGCCTCATATTCACTTTCCAGTTCATTTGCTTTTTATGGCAAGAATAACGCGTTGATAAGGAATATCTTACACCACACCTCTCAAACACATACGCACGCTTTGAAAAATTGCTCTGTCATTGTTAGGCGTTTTGGTGTGAAACTGCTTTTCCACtctaaagaaaacatttttgtaaCTGGAAGTATGAATCATTTGTCCTGCAGGTGAGCTgcctcacatttaaaaaataaaatctgtaacttAAAAGAAATAgttagacattttgggaaatacacttattcgcTTTCCTGCTGAGAGTTATGAAGAAGATTGCTGCTACTCTCGTATCTGTCAGATCAATATGAAGCTATAGTCAGTAGGCGTTTAACTTAGCCTAGCATTAAAGACTGGACACATAGGCTGCTGGACGTAGCttagtatatactgtacagacacaagagtggtattgatctcgTCATCTAACTCAAATTTTTAGGTTAATACCATAAGGATCCTGTCACTTCACAAGCCGAAAAGGAGCACGATGGCTTTTCCCCCTCACATTCCATTcagaacaacacacaaaaaagcattttgtttttactgttcTGATTTCTTTTCCATCAACTGTACATGACTCACAGTCACTTTTTTCTTCCTCACACTCGTGGCCTTTGCATGTTTAGCAATGATGAGGTTTTGCACCCGTCTATTGCTTTGTTAAAAACCCCTTCTGCTACGACCAGAGAGGAGCCACTGAAGCAGGTACATCAGAAATAATAATCACTGAAGCAGATTAGCTAACTGTGTGGTATTGCGCGTTCCATATTTTTGATAATTAGTATTTAATGAACTGGAAAACATGAGTTTTGTTCCAAAATGTGGCAATTAACATGACCCCTAAAATGCataacagcaaaaaaaatgaaaaaaaatgaaaaccaaatGAAATTACTTTTAAAGACTCGTTCCTAATTAAGTGCTCGAAATGAGTTCATTTTTACTGAGTGAATTCTGTAGATTTCTTAGACACTGAATGATAAACCTCAGgcaacaattttattttatgttgtatCTGGATATATAGCGTTTTGGAGTGGAATTCTTCACATCTCTTCCTTATTATCCTGACATGACTTCTCACAATATCACAGTGTTGTCTCTGTTCCCCTTGGGACTATGTAAATCATTAATGAGCATTCAGTTATTTCAAGTATTTTATATGAAAGGCAGGATCAAATCCAACGAGTTACCCAAAGCATTGAGTTTTTGTGTATTCTCTTGTGGTAAAGATAAACGCTTAAAGACATTATGACACAGACCTTGAGCATTTGCAGGGTATTGTAATCCTTTCATGGTGAGTTGAATAttgtttaaaaagtaatttttttcttttcttggatGAACTAACTGAACACTTTTTGAAGCAAAGTTGGCATATTACCATGTACACATGTTACAGAATATAAAAATGTGGTATAACAACTGCAGTATATAAAATACTGGTATTCCATGATAGATCTTTGTATTAATGTGACTCTCTTAAGAAAATGTCTTCAAACAATCAGACGATCTCCTTTTCCATTTTGTCCTGTCTTATAAAGATGTGTAAATTTGA

Function

NR:

description
PREDICTED: NT-3 growth factor receptor-like

GO: NA

KEGG:

id description
K05101 NTRK3, TRKC; neurotrophic tyrosine kinase, receptor type 3

RNA

RNA id representative length rna type GC content exon number start site end site
TU33473 False 1124 lncRNA 0.36 1 706333 707456
XM_039795075.1 True 5385 mRNA 0.45 17 706157 921549

Neighbor

gene id symbol gene type direction distance location
sv2ba LOC103359500,LOC101162590,LOC101062552 coding downstream 379429 301918 ~ 326728 (-)
mespba LOC103359507 coding downstream 409870 293684 ~ 296287 (-)
mespaa LOC101162828 coding downstream 415782 289261 ~ 290375 (-)
igf1rb LOC103359504,LOC104920736 coding downstream 472563 173297 ~ 233594 (-)
lrrc28 lrrc28 coding downstream 538642 160255 ~ 167515 (-)
mrpl46 mrpl46 coding upstream 100414 1021963 ~ 1030055 (-)
pdpr pdpr coding upstream 116206 1037755 ~ 1056294 (-)
LOC120556384 LOC104919714 coding upstream 254913 1176462 ~ 1190886 (-)
tdp1 tdp1 coding upstream 271491 1193040 ~ 1203082 (-)
LOC120555617 NA coding upstream 537615 1459164 ~ 1507908 (-)
G24864 NA non-coding downstream 114807 591011 ~ 591350 (-)
G24862 NA non-coding downstream 119813 586032 ~ 586344 (-)
G24833 NA non-coding downstream 235423 427702 ~ 470734 (-)
G24819 NA non-coding downstream 373026 330395 ~ 333131 (-)
G24818 NA non-coding downstream 375799 329778 ~ 330358 (-)
G24895 NA non-coding upstream 10709 932258 ~ 932793 (-)
G24914 NA non-coding upstream 108823 1030372 ~ 1032602 (-)
G24931 NA non-coding upstream 211970 1133519 ~ 1133789 (-)
G24934 NA non-coding upstream 228679 1150228 ~ 1150957 (-)
G24935 NA non-coding upstream 229473 1151022 ~ 1151337 (-)
pnoca NA other upstream 139555 1061104 ~ 1105167 (-)
LOC120555898 mctp2 other upstream 489125 1410674 ~ 1457108 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 588616 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 665995 1587544 ~ 1642348 (-)
cep89 NA other upstream 743221 1664770 ~ 1740839 (-)

Expression


Co-expression Network