G24941


Basic Information

Item Value
gene id G24941
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1171389 ~ 1174554 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU33553
CGATGGTAGTGTTGTGAGATTTGAAAGAGGAAATGTTCCCGTGCAGCTCTCAGCGTCATCTAGAACATCTATCCTAGTCTATTGTCGATGAAGCACTTCCAGACTTTTTGTACTTGATGATGTCACAAATTTGAGTTTCCACACTAGTTTTGGGAATTTCGGGAGAGAGTTGATCATGTTTACTAATATTTTTGGACTGTCTTATACCATAGGAATAGCATGTATGTACATGAACATACATTTTGGAAATGGACATAGTTCcccttttaaatttaaaaagtccACAAATAACTTACCACGTGTTTATCAGGAAACCTTCTTAGCTTATTGTTAACCATCCCACAATAGTATGCACTATATTTAGCCTTTCAAAACACTGTTGCATGAAGGTGGGGATGTGGGTATCTTAAAGCAGCATCCTATACATTTCTGGCAGCAAACACACAGCCCTGACTTATTCCTTAGAACGTGTTAGACATCCAGCAGACAAGATTGACTTAACTCTGTTTTGGCTTCCACCGACCCCTAAGGacaatatctggctctttagctgctaaatgctccactaggTCCAAGAGCTAGTTGCTGGGTAGGTAGTGTACAGCACTATAAGACACAGGGTGGCTACAGCTGGAAACCCGTTTTTAATGAGAGTGGAGTTTGGGGGCTAGAAAACAATGAGCCAAAAGGGGAAAAATGATGAAGGAGCTACAGAGTTGGGTGATAATTGTCTGTGGTTCACCACTACGAGTGACCTTTTCACTTTACACATAGTCGTTTGAGCCACTTTTAATATCAAAAAAGCtaagtgcagctttaattgaTCAGGTTCTAACTAAAAACTACATTTTAATGATACTGAAAGTTAGGGTTCAGTAGCTGATACTCTTAAACACTGTATAAATTCTATCCGACATTGAAAGTGGTATCCACCTCTTTTGGTTGCATACGTGTAGTTAGCTTATATTTCACTCAGCAGTGTGACACATTAACGACTGACACTAAACCCTTTCCCACTAGCTAAAGAGTAAATAATACTGGAGTTTGGTGTGTCAGTTATTAGGTGATCCAGCAATCCAGAATCATTTCGGTAATGTTACAATGTCAACACATGCCTTGTACTGTATGGTTTTTAGTTGAAGTGCCTTATTTATTTCAGTGCATTAACACAGGATTAGTGCATGCAGAGGGACTTCTACAATGGCTGTACATCTATCACTGTATCAGAACCAATGCAAGAAAGCGCCGACACTAAAGTGGCTTCATTCAAACCGGTTCATTATTGTTCATCACCAGGTGCTTTACAGGCTAAGCTACTAGTTCAGAGTTAGAAACTCGACACAAATACCTCACTTTACCCCCCTCAGCTATAAGCTACAGCCCGCAGGTTCCTCCACAGCTGCTTCAATGTGAATCCAAGATTAGACGGTCGAGGGTAAAAAGTAACCGCAGAGCTGATTTATTCTGAGATTAACGGCTATGAAGACGCTTCACCGGCTGATCTGGAACACCGGAAATGACAGCGTCCTCTAAAAGGGAAAATTCCTTCTCAAACTCGAGCCAATATTAAGTTTGAAAATAAAGGGAAATTCCACTCCAAAAAACTATTTATCATTCATAAGCTCCTGCTTCCACCAAGTCCAAGAAATacttataaaatatgttttcccTTCTTCCTGGTGGAGCACTAACAGTGTTGGTTCCAGATTGAACGTCTGACAGAATTGAAGTTTTGGGGTGGAATGTCTCCTTCGTTGTACGGCAGCACAGCTGTCCCACGTGTCTTTTGCTTTAAGCGTTTGTAATACTCTGAGTCATCATTAGCAAGTGACTTAGCTTTTCTATCATCTGTTTGAATTATTTACACCAAAACATCGAAAAATACTATCCCACTAGGGgttagaattattattttttctataAATCTGCCAAGCAGAAGCCTTTGAAGAGAACCCGTGGGTTCATTTAAAACGACGTGCTGTTTGAGATTATTTCAGGATTTTGAATCCTTGCAGTTGCTGCCTTCATGGTTTTCTCATAAAGTTGTACTTTGGAGTTGTGAAGCAGCAAATTGATGTGAAATGAAAAAGTTGTTTATTAGTGTCATTTTAGAGCCAAATAATctgaaagtaaaaagaaatgaaaacgaTAAGAGAATTAACATGAGACCAtaaccaacaaaaacacaccaagTCAACAGAAACTCACAACCTCTCGTCTTGTTTGTCATTCCTATCGATTGCTCTTTGTTTCTTGACATTTCATTTTGCTTTCAGTTTTTGACCCCAAATTGGCTCCGTACTTTGTCTTTACAAAGTGTTTATTCTTATCATCAACTTGGAATGCATAAGTCAAAGTTGTCATGAAATGGAGAACCAGTTTTCCCATAAATGACAAAGAAAGCCTTTGCTCTTCCAGTGAGATCAGCCCTGTGTCCTTCGGACACTTCTCATTGGTCAGTTTTAGGCCTTCAGCCCTCCGTTGCCTCCCTCtacggttttgtttttaaggatGAGCTTCCGgaggcacctgggtagctcacctggttgagcgtgcgccccatgtacagaggctcagtccttgatgCAGCAGCCACGGGTTCAATTCTGACCTGcagccttttgctgcatgtcatcccccccccgCTTTCAGTACTTTAGCCATCccatcaaataaaggcctaaaataccacaaaaaaaaaaagatgagctTCCTTCCGCTGGTTCTTGGCGGAGGTTTCCCATCCCATCCCTGGCGTTGACTACATCTTGATCCCATTAGTCTTTGTTTTGCCAAATCCATCTTACTGACCCTTTTACACAGACAGTACAGTAAAAAGTGGTTCTGTTTGTGTAGTCACTGGGCTGGTAGTGGGACACTATCGGGGTGTTAATGGGGGTGGGGTTAGGGAGAGAATGGGATGTGAGGCCTGCCGTGGTTTCAGTCAGTCACGCCTCAGGACTGGACGTTGCCGCTGTCCGTTGCTTACCTTTGTCAGTGTTGTGAACACACGAGATGCTGTAGGACATTTGAACAGTTGTATTCcaaaatgctgtttttaatTTAGGTGAAAAAAGTTCATCATTCATGCATTCAACATAAAATGTAGATGTTCCAGTGTTAATGTCCTTTAATCAGCCAATTACTGTAAATACTACTTTAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33553 True 3166 lncRNA 0.41 1 1171389 1174554

Neighbor

gene id symbol gene type direction distance location
pdpr pdpr coding downstream 115095 1037755 ~ 1056294 (-)
mrpl46 mrpl46 coding downstream 141334 1021963 ~ 1030055 (-)
sv2ba LOC103359500,LOC101162590,LOC101062552 coding downstream 844661 301918 ~ 326728 (-)
mespba LOC103359507 coding downstream 875102 293684 ~ 296287 (-)
mespaa LOC101162828 coding downstream 881014 289261 ~ 290375 (-)
LOC120556384 LOC104919714 coding upstream 1908 1176462 ~ 1190886 (-)
tdp1 tdp1 coding upstream 18486 1193040 ~ 1203082 (-)
LOC120555617 NA coding upstream 284610 1459164 ~ 1507908 (-)
rhpn2 rhpn2 coding upstream 569638 1744192 ~ 1774421 (-)
lrp3 lrp3 coding upstream 643877 1818431 ~ 1831946 (-)
G24942 NA non-coding downstream 1630 1165662 ~ 1169759 (-)
G24935 NA non-coding downstream 20052 1151022 ~ 1151337 (-)
G24934 NA non-coding downstream 20432 1150228 ~ 1150957 (-)
G24931 NA non-coding downstream 37600 1133519 ~ 1133789 (-)
G24914 NA non-coding downstream 138787 1030372 ~ 1032602 (-)
G24954 eprs non-coding upstream 34004 1208558 ~ 1209459 (-)
G24955 eprs non-coding upstream 41972 1216526 ~ 1216930 (-)
G24974 NA non-coding upstream 66213 1240767 ~ 1242703 (-)
G24978 NA non-coding upstream 78164 1252718 ~ 1254624 (-)
G24987 LOC102205592,LOC101476278,LOC102787001,LOC102297232,LOC100534518,LOC101075605 non-coding upstream 92132 1266686 ~ 1266960 (-)
pnoca NA other downstream 66222 1061104 ~ 1105167 (-)
ntrk3b NA other downstream 249840 706157 ~ 921549 (-)
LOC120555898 mctp2 other upstream 236120 1410674 ~ 1457108 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 335611 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 412990 1587544 ~ 1642348 (-)
cep89 NA other upstream 490216 1664770 ~ 1740839 (-)
G25228 NA other upstream 1100921 2275475 ~ 2277091 (-)

Expression


Co-expression Network