G24942


Basic Information

Item Value
gene id G24942
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1165662 ~ 1169759 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU33554
ACTGTtcagatgattaaaaaaaatgaaaattataaatgtattataataCATGTTTATTCTTTGGATTGCAGCATAGAATTGcataaaacaattaaattaaTCAAAACCCAAACTTGTGCTCAGATTTGTCTTTTTATAAGTCTTAATATGcgcatatatacacatacatacatacatacatacatagaacaACCACTCCAATGgtgcactcacacatacacatgacaCATCAAGGCAAACCCGTTCCACAGAATCAACAGTAGCAACAAACAATTGATGATTGATGATTAGTTAGGATGATCTAGTAATAATGTTGACCGGGCCGAGGCCACATTAAACTCATGTCCTATTATTCTACCTTTTCTTCAGCTGAATGTGTCAACGCTTACAGGGACTGGAGGGGCTTTTCTGCAGGAGTAACATGGTTCTATTAAAACACCCTGACTTAGCAAGCACCAAGCCCTCTCCTTAAGCTCCTATTAGCCTTCCATTATTACACCGCTCAGTCAATATGGCTGCTGGTACCTAAGAAATTTTAATGCAACATTACGTTGATACCAACTGCCTCTGAAATGCACCAAGAGGAGAAGTTGTGTTTGAAAGTTTTCCTGGAACCCCGCTGTTGACATAATCTGTCATTGCcaaaaaactacaacaaaacaaactgcaACAAGGCTGCATCGCATCACCTGACAGCCAGGTATTGCTTGTTTGTGAGGCTTATTCGAATATTTCAGAACACACAGAAAGGGAACTGGTTGCAGCCAGTTCAGCAGTGAGACAGGTTACAACTCTTTGGCCCCGTTTTCACCTGGTATTAATTAAAATCCAATCTGAGAGATCCGATCACAGGTGGACTGCTTTCAGTATGTGTCCCAAGTGAGCACCTGTGATCGGATCCAACTTTCCTGCTCTATATAGGGTTAGCTATATGCTCTATATAGCATTAGCTATATGCCCTGCTGCCACAGATCTCCAGACAGCTGGGGATATAAGAGCAAGCAGCACAGGAACAAAACCAGCATCACATCAGCGACAGTATGATGGGTGATCAGACGTCCCAGTTTGGATTCACTCCTCTAACAAATACACAGAATGAAGGTTTCCAACAGGGAAGCTATCTGCTCTATCAAATGAGaggacatttgtgtgtgtgcgcgcgctgtttGTTAGAATAACACTGGTAACACTTAAcggtaagggtacatgaattatcatgaattcatgcatgaattaattgagacatgtattattatgcattatgtAATTAATGATTTATGTATTGCTGCATTCCTTAATATCccatgaatcatcaggaattgactTGTTCATAGTCTGTCGTTTGTGACCTCATACATGAACAACAcaactaaagcattaggtaCTTGGGCACATCATTATGAATTATGATTTATTAAGCATGATCATGATTTTTCTGCAAAATAATGTGATATCACTGCACAAATTCTGATTTGAACACAACTTGTGCAAAATGATGTCCCCACCTtacctaatgctttagttgATGTGTTGTTCATACATGAGGTCATGAATGAGAGGCTAGGAACtcatgtcaattcctgatgattcagAAGATGTAAAGGAAtgaagtaatgcacaaatcataaattaattcatgcatgaattcataattcatgtacccttactgtaaagtgtttccataactttagttcaagcctgtggcgctccatggtgttttaagcccccaacgtctccttccaggcagcgctgtgacCGCTGACTTCAAgacacctaaccttaaccataaccataaccataacctaatcCTAGTGACGTTGGGGTCTTAAAACACGGATAAATGCCTGTGGCAGCGGTTCCAAATAAGTTTAgtgccatgcaatgaaaaataccttttcactaagtttttcacaagttcagtgggtggattttccaaaagaatgctttaattttgaaaaataaattggtCCCACACGAAACtcaatgtcttttaatattatttcttagatatgtaggctacataccaagaaaattcatgaatattaactgagATACCCCATAATGTTGTTGCTATTGGCAAAATTGTctctaatctgtctgtgtctgtcctgagctggcacatgttcacgttaaaaagtgTGTGCGTacacgagcactacggtcacgcgcaaagtgtcccggttttagttctGGGAAATCTGCTCACCCTACAGTATGATAACATCCAAAACTCACAATTCAgtctcagtggtttctgtgacacAATAATTACTTTGAATGAGTACATACGTTCGCTCACAGTTAAGCAGGCATTCCTTAATGTGGACCAGGACACTGACGCGTACACACTGCTACAGGACTGAGGTCACATGTGGCCTAAGCCACCTCCGAATGTGGTCTGAGTTAATGGATCGCAATGCGCCCTGAGAGTGGTTTTACCTGTACATAAAGCAGTCCACTCAGATCAGGTTTTAATACCAGGTGAAAACGGGCCTTTGGCAGCGAAAAAAGGCCTCAGGGAAGAAGTCGGCCGAACACTGTGGACAGGCGAGAAAGAGGTAGTAAAAAAGGTGAAGACTCACTACCAAGGTAGGAAAATATGTTGTAGTACctggcaaataaaaaaaaaaaaaaaattcaagctAACTACTTTTCTGCAggtacatttcttttttcacaTCTGCTCTGATCCACTGATCAGAGCAGATGTGGTGCTGTAATGATCCCAGGTAGGGCACTGGTGGGTTGTAAATTCACTGATGATTTAATAGTGGTATATAAAATTCCCTGTGTGGAAGTCAGGCCTTTTTTGACTGGAGGTGTGACAGCAGCCAAATGACCTACCTCAGAAGATAAAGTTAGTCCAGTAAAAAAGGGGGatatttctctgtctttttaaAATAGTAAACCAGAAAGGTTTCAAATGGGTTTGGAATGGTCCTGTTAAATaatagattacattacattttatagTACAACAGTGATGGGTTTAGTTAGAGAGCTGGGACTGGTTCTGCTAAAAACCAGTCTGGCTCCAGGTTGAAGGCCACGTTAAGGCAGGGGATTTGTCGCTTCAGACCGGTTAGCATGCAGAAAAAGATATGGAACCAAAATCTGAGCAAAACAGAAGCACTTAAGACAAGAAAAGAAACCAAAAGAAATGAAACATTCTGAGGGGCTGAAGATTCATACACATCAATATGAATATGCTCTGACACAAATCACATCATTAAAAATGGAACGGAACGTGGTTCTTATGGTTGATACAGACAcataaataacactgctggCTGTGCTCTAATCTCTACAGCGGTAGAGATGTACACCACTCAAATAGTTACCACATTAAATCCATTCTGAGCAGAACAATATTACTTTTCTATTTTTACAGTTTCTTACTGAAATGGCTATGGTGCATAAGGCAGCCCACGAGCTGCCCTTTCCTGTCTAATGTCAGTGTCACACTTCATCTGTAATGACTGATGCTGAGTGAAGAGTTCTAGAGGAAGATGTGTGCTGGGAGAAAAGACATGTATCTGTTATTACCACCATGTTAGAGCTTAGCTCTGCAGTCAAGTAAAATAATAGCTCCCAATTTAACCAATATTCGTATTTTGTACTTGAAAGGTGATGAATATGGCTGAAGAATATTGAATTGAAGGCAGAGAATTAAAACTATTTCAGTACAACAGCTAACTTGAGAACACTGAATCATAAAATAAGACCAGGTTGTATTTTCTTCCTACATATACAAGTGTTCCAGAAATGAACTCTTCCAATTCCCATCTGAAGACTTTTGTGCAAACGAATTGAAGCGTCGATATGAAAACAGTATGTGGAAGACACATGATCATATGGTTTCTGAggcacaacaacacaaaaagggACATCCAGAAGCCTGAAGTGATCTCAAACCCCTATTACAGTGCCCCGAGCTAAGACCAGGATGGGAAAGTACACCAGTCAGAGACTCAGAGACTGGAATATTAAATGAGTCAAGAGAGCAGGGAAGGTGAAGATTTGTTGCTCTCAGCTAAGGTCTGTATAATAAGTCAAGCGGCAGCTGGTGGTCATTTCCCATCTTGGCAAGAACTCGCA

Function

NR:

description
PREDICTED: ankyrin repeat and SOCS box protein 7, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33554 True 4098 lncRNA 0.40 1 1165662 1169759

Neighbor

gene id symbol gene type direction distance location
pdpr pdpr coding downstream 109368 1037755 ~ 1056294 (-)
mrpl46 mrpl46 coding downstream 135607 1021963 ~ 1030055 (-)
sv2ba LOC103359500,LOC101162590,LOC101062552 coding downstream 838934 301918 ~ 326728 (-)
mespba LOC103359507 coding downstream 869375 293684 ~ 296287 (-)
mespaa LOC101162828 coding downstream 875287 289261 ~ 290375 (-)
LOC120556384 LOC104919714 coding upstream 6703 1176462 ~ 1190886 (-)
tdp1 tdp1 coding upstream 23281 1193040 ~ 1203082 (-)
LOC120555617 NA coding upstream 289405 1459164 ~ 1507908 (-)
rhpn2 rhpn2 coding upstream 574433 1744192 ~ 1774421 (-)
lrp3 lrp3 coding upstream 648672 1818431 ~ 1831946 (-)
G24935 NA non-coding downstream 14325 1151022 ~ 1151337 (-)
G24934 NA non-coding downstream 14705 1150228 ~ 1150957 (-)
G24931 NA non-coding downstream 31873 1133519 ~ 1133789 (-)
G24914 NA non-coding downstream 133060 1030372 ~ 1032602 (-)
G24895 NA non-coding downstream 232869 932258 ~ 932793 (-)
G24941 NA non-coding upstream 1630 1171389 ~ 1174554 (-)
G24954 eprs non-coding upstream 38799 1208558 ~ 1209459 (-)
G24955 eprs non-coding upstream 46767 1216526 ~ 1216930 (-)
G24974 NA non-coding upstream 71008 1240767 ~ 1242703 (-)
G24978 NA non-coding upstream 82959 1252718 ~ 1254624 (-)
pnoca NA other downstream 60495 1061104 ~ 1105167 (-)
ntrk3b NA other downstream 244113 706157 ~ 921549 (-)
LOC120555898 mctp2 other upstream 240915 1410674 ~ 1457108 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 340406 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 417785 1587544 ~ 1642348 (-)
cep89 NA other upstream 495011 1664770 ~ 1740839 (-)
G25228 NA other upstream 1105716 2275475 ~ 2277091 (-)

Expression


Co-expression Network