Gene
RNA
| Item | Value |
|---|---|
| gene id | G24955 |
| gene name | eprs |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053114.1 |
| NCBI id | CM020911.1 |
| chromosome length | 46923577 |
| location | 1216526 ~ 1216930 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| eprs | Predicted to enable several functions, including RNA stem-loop binding activity; proline-tRNA ligase activity; and protein homodimerization activity. Predicted to be involved in several processes, including cellular response to insulin stimulus; prolyl-tRNA aminoacylation; and regulation of long-chain fatty acid import into cell. Predicted to act upstream of or within cellular response to interferon-gamma. Predicted to be located in cytosol and plasma membrane. Predicted to be part of GAIT complex; aminoacyl-tRNA synthetase multienzyme complex; and ribonucleoprotein complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy. Orthologous to human EPRS1 (glutamyl-prolyl-tRNA synthetase 1). |
| description |
|---|
| PREDICTED: bifunctional glutamate/proline--tRNA ligase isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU33574 | True | 313 | lncRNA | 0.51 | 2 | 1216526 | 1216930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tdp1 | tdp1 | coding | downstream | 13444 | 1193040 ~ 1203082 (-) |
| LOC120556384 | LOC104919714 | coding | downstream | 25640 | 1176462 ~ 1190886 (-) |
| pdpr | pdpr | coding | downstream | 160232 | 1037755 ~ 1056294 (-) |
| mrpl46 | mrpl46 | coding | downstream | 186471 | 1021963 ~ 1030055 (-) |
| sv2ba | LOC103359500,LOC101162590,LOC101062552 | coding | downstream | 889798 | 301918 ~ 326728 (-) |
| LOC120555617 | NA | coding | upstream | 242234 | 1459164 ~ 1507908 (-) |
| rhpn2 | rhpn2 | coding | upstream | 527262 | 1744192 ~ 1774421 (-) |
| lrp3 | lrp3 | coding | upstream | 601501 | 1818431 ~ 1831946 (-) |
| trnat-agu_3 | NA | coding | upstream | 616391 | 1833321 ~ 1833394 (-) |
| dnaja2a | dnaja2 | coding | upstream | 618158 | 1835088 ~ 1846922 (-) |
| G24954 | eprs | non-coding | downstream | 7067 | 1208558 ~ 1209459 (-) |
| G24941 | NA | non-coding | downstream | 41972 | 1171389 ~ 1174554 (-) |
| G24942 | NA | non-coding | downstream | 46767 | 1165662 ~ 1169759 (-) |
| G24935 | NA | non-coding | downstream | 65189 | 1151022 ~ 1151337 (-) |
| G24934 | NA | non-coding | downstream | 65569 | 1150228 ~ 1150957 (-) |
| G24974 | NA | non-coding | upstream | 23837 | 1240767 ~ 1242703 (-) |
| G24978 | NA | non-coding | upstream | 35788 | 1252718 ~ 1254624 (-) |
| G24987 | LOC102205592,LOC101476278,LOC102787001,LOC102297232,LOC100534518,LOC101075605 | non-coding | upstream | 49756 | 1266686 ~ 1266960 (-) |
| G24988 | NA | non-coding | upstream | 61639 | 1278569 ~ 1278817 (-) |
| G25039 | NA | non-coding | upstream | 241107 | 1458037 ~ 1458542 (-) |
| pnoca | NA | other | downstream | 111359 | 1061104 ~ 1105167 (-) |
| ntrk3b | NA | other | downstream | 294977 | 706157 ~ 921549 (-) |
| LOC120555898 | mctp2 | other | upstream | 193744 | 1410674 ~ 1457108 (-) |
| LOC120556048 | abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 | other | upstream | 293235 | 1510165 ~ 1555646 (-) |
| LOC120556047 | abcc12,LOC102304683,LOC101479372,LOC102203605 | other | upstream | 370614 | 1587544 ~ 1642348 (-) |
| cep89 | NA | other | upstream | 447840 | 1664770 ~ 1740839 (-) |
| G25228 | NA | other | upstream | 1058545 | 2275475 ~ 2277091 (-) |
