G24972


Basic Information

Item Value
gene id G24972
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1253197 ~ 1254591 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU33594
aaaacaaaatatatataaaaaaaataaacatacatacatacacaacgaAATAATAAATATGAGAGAAAGTGGATATTCAAGACAGTACAAGTGGGCTACATGCCTTCTGTGACTATCACTACACAGGTTTTCTGAGGTCCCTGAGTCTCCAAGGAGGCACACGCACAAAACTAGAGGGTACTCTTAACAAGTTTAAGGGAGCATTCAGTTACCTACTATGTTGCAGATATCTGCAATAGTGTTATTTGTTTGTCAGAATTATAGCATACAATACCAAAATTATAATTggattctttatttttatgaatACGCCTGTTAtcattatgtgtatgtattatttgTCAGACATGTCACAGTGAATAGTGTCAGCCCTACAGTCCCTTCAGTCCCTACATTTCCTTTTCATGTATGTAGTATATTAAATCCACTGGTGTCAAAGTAGTATTCTGGATTTTGGAATTTGACTTAAACTGCACCATGCTGTACATTTACTGTAAGTAtgaaaacactcaaaatgtacTTCTAAATTGGAATGCTATATCAGATGTCACCTTAAACCTGTGTAGCACACGAGTTAAAGCATCATCTCATGTGAGAGGCTTCACCAGTTCTGCAATCAGATACTTACAATAGAGTCCAGATATCCCAAAGTGGTTTTATAACCATTCACACCTTAGTACAAGTGATGTAGAAGACTTTCACAGTGACCTTAGtgacctcatcatcatcatctctcatGTGATAGCAAGAGGAGCACAATCAACAGAGATTTCAATGTATTGGATTGTCCTCCAGTCTGTTAAACTGATGAATCCTTGTAATGGACATCGCTGAATATCACCTGTTTATTGTAATCAGAGGCTGACCCATGCTGGGATACTATCAAAGGTATCCAACAAAATGACTCACAGGACAAGTCACACACCCAGAGCTGGTGTATGGGGGGAAGTGAGGGTAGTGGTCAGGAGCAGATTTCACCTTGATTATTACAACAAAAGTTCAACCAGCTGTCTCCAGCTGTGTATTTCTGCCATGAAGTGACTCGTGAAGTCGGCTGCAATTTACCATTAAAAAGAAGAGTCATTGCTGGTCAGTGCATAACGGCTGTGGGGGATTTGAGACAACACTACCCTGTCCAAATTTGTGCACAACACAAGTGAGTACATAGCGTACGCATGTAAGTGTACTCTTGGAAGTATCTGAATTGAGACACAGCATTAGTCTTGGTAGATCTGTGcatcttcaatacagcatgatgttcattttgtaaatgtatTAACGATAAAGCAGGGCATGCTTTAGGGTGTAGCTACACTCCCACCTGTCAATCATTATAGAGGCTAAGCTATGTGTATCTATGGaaatgtgtacattaaaatgGCTGTGCAATTGTTT

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33594 True 1395 lncRNA 0.39 1 1253197 1254591

Neighbor

gene id symbol gene type direction distance location
LOC120555232 NA coding upstream 1296 1246885 ~ 1251901 (+)
glo1 glo1,LOC103369175,LOC104919745 coding upstream 12740 1228417 ~ 1240457 (+)
eprs1 eprs,LOC102787790 coding upstream 25539 1204494 ~ 1227658 (+)
kif13ba LOC103358451,LOC107099140,LOC107397337 coding upstream 90179 1103597 ~ 1163018 (+)
mrps11 LOC107594750 coding upstream 215704 1030354 ~ 1037493 (+)
LOC120555381 LOC102205592,LOC102787001,LOC102297232,LOC101476278,LOC100534518 coding downstream 8359 1262950 ~ 1269003 (+)
LOC120555491 NA coding downstream 54231 1308822 ~ 1311760 (+)
LOC120556244 LOC103369184,LOC102786692,LOC100700148,LOC101476567,LOC102297530 coding downstream 57857 1312448 ~ 1364726 (+)
LOC120556440 LOC104962514,LOC103369193,LOC107381980,LOC106931206 coding downstream 123419 1378010 ~ 1385075 (+)
zgc:165481 LOC103369239,LOC108241605,LOC103379234 coding downstream 420150 1674741 ~ 1698359 (+)
G24926 hmbox1,LOC104919714 non-coding upstream 67970 1184725 ~ 1185227 (+)
G24920 LOC104919714 non-coding upstream 75016 1175326 ~ 1178181 (+)
G24918 NA non-coding upstream 83502 1165649 ~ 1169695 (+)
G24923 NA non-coding upstream 118595 1134061 ~ 1134602 (+)
G24890 NA non-coding upstream 306137 946797 ~ 947060 (+)
G24984 NA non-coding downstream 3928 1258519 ~ 1258816 (+)
G24991 NA non-coding downstream 48128 1302719 ~ 1302952 (+)
G25011 NA non-coding downstream 131457 1386048 ~ 1386264 (+)
G25008 NA non-coding downstream 158504 1413095 ~ 1415747 (+)
G25144 NA non-coding downstream 514691 1769282 ~ 1774440 (+)
mapk8ip1b mapk8ip1,LOC102793463 other upstream 1168771 11843 ~ 84426 (+)
G25173 dnaja2,LOC106524269 other downstream 584742 1839333 ~ 1842811 (+)
G25204 NA other downstream 827367 2081958 ~ 2083319 (+)
adamts18 adamts18 other downstream 985823 2240414 ~ 2312157 (+)
mmp15b mmp15,LOC104948393 other downstream 2226706 3481297 ~ 3518086 (+)
G25431 NA other downstream 2530342 3784933 ~ 3785542 (+)

Expression


Co-expression Network