G24974


Basic Information

Item Value
gene id G24974
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1240767 ~ 1242703 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU33596
aaaaaagttaacttcatgccctaagtaatgcatgttaataaaatgaagcagaacacattcagaagacaacggaataactgttaaacacgtttatttcggatcagagcagcagctgatttaacacatcagactcgaggattaatcttagcctgcctgttagcctgctctggaccaggctagctgcaaagaataaatcgccatggttacttggctgggtttaattcaacctgcttttgtgcaaccaagtcaaagctaaattcatccaggataacctgaatatcccggcttaatcccttatcctggttttgtgcaacaggcccctggtcttcctgggTAAGATttgactttctttttaaaatgtacctTTCCTGTGATAAAACGAATGTTACTTAGAATATTATTCCACAAAGAACTTGCTCTGTAAATGAAAGTTGTTTTCCGGTAAAGGCACAATCATCTGCCCCCTACTGGCTCCTCTTGTTAAATAAGTATGGATATCTGAACTCTAagttgttatcaaaaataaatgatggtgtcGGAGTTTGAATAACAGAGTGCAACAAAGTAAGCACATTGGCTAAAGACTCAACCATTTAAGACATTCATGCATTTTAACATTGGACCTAGAAAGTCTAACTGCTAGGatgaactctctctctcactacatTTATTCATAAACTTAGTTTTTTTATCCTTTATTCACACAAGCAAAAATGAAAATCTCATAAGGTAAACCGCAACAACCAAGCCTGTTTCTATGTTAACACTCACCATAAATGACGGCACCAACAAAGGGAGCTCAGCGAGGTGGAAATTAGTtgaaaagagaagagacagagctGATACAGGGCTATGTGGTTCCTCCCCCCCACATATATCAGAGCTCTGATGCACCGGTTTCCCACTTAAACTGACCAATCGGAGCAGGGTGTAGAAACGCCTTGCCCAAAAGATCGGAGTCATTCACCTGTGCATCCACCAAACACACAACCGAAATCTTTAAAAACTTGTTTATCCTCGGTAGTCAAATGTCTTAAGTGGTGTGAAGCAGAGCGAGACCAGGACAGATTTTAATGATCTCAGTTCTCctcaaacagacaaacataagcATCTCATTTGACTTGCCTTTTACATATTTCCTACCTGTAGATTTGCATATTATTTTGCAAGAAGTACCCCAGACTGACATGCTGAGATGTGCTTGAATTAATTGGTTGAAATAATTCAAAATTTTGATTTGTGACTGCAGTTCACACTTCCACGGTTAGTAACATTTTAGCTGCGTTTTGCAAATAGTTGCAAAAACTGGACCTGAAGTTAAAATTATGTTTATGTTCCTGTTATTAAAAAATGCAACAGAGATTTATGAAGCAGTCACCACTGGGGTTGGAAGCAAGGACCTCCTGTTTACTAGACAAGTGCTTTAACCAACTAAGCCCCAGTGCTTTTTGAAATGGCTTGATTTCAATTTGCAATAAAAACATGTTAGctctttacatacagtataagtaCTTTGATGATTACAGACATATATAAAGAtgttagaagaaaaaaagaaacttgcAGATAACTGGCTCACTGGTCAACTCTTGAACTGGAAAGATAGTTGAGAAGGCAACACCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33596 True 1624 lncRNA 0.39 2 1240767 1242703

Neighbor

gene id symbol gene type direction distance location
tdp1 tdp1 coding downstream 37685 1193040 ~ 1203082 (-)
LOC120556384 LOC104919714 coding downstream 49881 1176462 ~ 1190886 (-)
pdpr pdpr coding downstream 184473 1037755 ~ 1056294 (-)
mrpl46 mrpl46 coding downstream 210712 1021963 ~ 1030055 (-)
sv2ba LOC103359500,LOC101162590,LOC101062552 coding downstream 914039 301918 ~ 326728 (-)
LOC120555617 NA coding upstream 216461 1459164 ~ 1507908 (-)
rhpn2 rhpn2 coding upstream 501489 1744192 ~ 1774421 (-)
lrp3 lrp3 coding upstream 575728 1818431 ~ 1831946 (-)
trnat-agu_3 NA coding upstream 590618 1833321 ~ 1833394 (-)
dnaja2a dnaja2 coding upstream 592385 1835088 ~ 1846922 (-)
G24955 eprs non-coding downstream 23837 1216526 ~ 1216930 (-)
G24954 eprs non-coding downstream 31308 1208558 ~ 1209459 (-)
G24941 NA non-coding downstream 66213 1171389 ~ 1174554 (-)
G24942 NA non-coding downstream 71008 1165662 ~ 1169759 (-)
G24935 NA non-coding downstream 89430 1151022 ~ 1151337 (-)
G24978 NA non-coding upstream 10015 1252718 ~ 1254624 (-)
G24987 LOC102205592,LOC101476278,LOC102787001,LOC102297232,LOC100534518,LOC101075605 non-coding upstream 23983 1266686 ~ 1266960 (-)
G24988 NA non-coding upstream 35866 1278569 ~ 1278817 (-)
G25039 NA non-coding upstream 215334 1458037 ~ 1458542 (-)
G25110 NA non-coding upstream 417791 1660494 ~ 1660735 (-)
pnoca NA other downstream 135600 1061104 ~ 1105167 (-)
ntrk3b NA other downstream 319218 706157 ~ 921549 (-)
LOC120555898 mctp2 other upstream 167971 1410674 ~ 1457108 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 267462 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 344841 1587544 ~ 1642348 (-)
cep89 NA other upstream 422067 1664770 ~ 1740839 (-)
G25228 NA other upstream 1032772 2275475 ~ 2277091 (-)

Expression


Co-expression Network