LOC120555898 (mctp2)


Basic Information

Item Value
gene id LOC120555898
gene name mctp2
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053114.1
NCBI id CM020911.1
chromosome length 46923577
location 1410674 ~ 1457108 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU33668
ATGTTTGATGCTGACACGAAGAGAAGGAAGTCTGTAAAGCCACAGATTACTGCCCATGTTCTGAGCGGTTGCACTATAATGTTCAGCAGCCACGAGGTGAATGACGTCGGAGGGTCTTAACAGCGGAAAAAGCTGTCGGTGATGTCCAGAtctcagacacagacagactgaaGCTCCCTCCCATCATGGACTCCAAGAAGCCTGGCATGCTGCGGCATCTCCGCCAGAAGATGCTGCCACACCTCCGGCGAGACAAGACGAGCCCCGGCAAGCACCTGGTTCAGCTCGAACACCCAATGGACCATCGGATGAGCTCCTCCGTTCCCGACATGAGGAACATGAGGCAGCACGAGTATGCTCCCGTCTCCTCCAGCATGCAGCCCCAACAGTACGACTCTCCCAGCTACAGCAACCCCTGCTCCCCACTCGTCAGGCCTGCCCGGGGCCTGGGAGGAGGTGGGAGTGGCCTGACGATGGGAGTAGTTGGTGGAGGAGTGGGGAGAAGTGTGCCTGCAGACTGCACAGACTGGGCTTCCTCCCATGAGTCATTCAGCAGTCTCTGTGACGAGGACAAGAGCTCTCCAGAGACAACCTGCAGACCTCCCCGGGGCATGGAGCCTGAGGAGCTGGGCCTACCCGAGATGATGACTGTCTACAGCCCAGACCCTCCCTCTGTGGAGGTGTCCCAGGACAGCTCACAGTATGATAACGATTTCAACAGTCACGGGTTAAAAGACGGGGACAACCAAAATTGTGAGATGGGCAACGAGGTTCTGAGTGTGTCGGAGAACATCAGGGATCCTCCCAGGTCCTTCCTGCTCACCATCCACCTGAAGGAAGGACGCAACCTGGTCATCAGGGACCGCTGTGGTACCAGCGATCCTTATGTGAAATTCAAATTGGACGGGAAAACATTCTACAAAAGCAAAGTGGTTTATAAAGACCTCAACCCCAAATGGAACGAGACCTTCTCCCTACCTGTGACGGTCTGCACCA
>TU33669
TCACTTTGGAAGAGAGTGATATGTTGGTTGCATGCGGAATGAGAGAACAACCCCCATCGTGTCACTTAAGCTGTCGGTGATGTCCAGAtctcagacacagacagactgaaGCTCCCTCCCATCATGGACTCCAAGAAGCCTGGCATGCTGCGGCATCTCCGCCAGAAGATGCTGCCACACCTCCGGCGAGACAAGACGAGCCCCGGCAAGCACCTGGTTCAGCTCGAACACCCAATGGACCATCGGATGAGCTCCTCCGTTCCCGACATGAGGAACATGAGGCAGCACGAGTATGCTCCCGTCTCCTCCAGCATGCAGCCCCAACAGTACGACTCTCCCAGCTACAGCAACCCCTGCTCCCCACTCGTCAGGCCTGCCCGGGGCCTGGGAGGAGGTGGGAGTGGCCTGACGATGGGAGTAGTTGGTGGAGGAGTGGGGAGAAGTGTGCCTGCAGACTGCACAGACTGGGCTTCCTCCCATGAGTCATTCAGCAGTCTCTGTGACGAGGACAAGAGCTCTCCAGAGACAACCTGCAGACCTCCCCGGGGCATGGAGCCTGAGGAGCTGGGCCTACCCGAGATGATGACTGTCTACAGCCCAGACCCTCCCTCTGTGGAGGTGTCCCAGGACAGCTCACAGTATGATAACGATTTCAACAGTCACGGGTTAAAAGACGGGGACAACCAAAATTGTGAGATGGGCAACGAGGTTCTGAGTGTGTCGGAGAACATCAGGGATCCTCCCAGGTCCTTCCTGCTCACCATCCACCTGAAGGAAGGACGCAACCTGGTCATCAGGGACCGCTGTGGTACCAGCGATCCTTATGTGAAATTCAAATTGGACGGGAAAACATTCTACAAAAGCAAAGTGGTTTATAAAGACCTCAACCCCAAATGGAACGAGACCTTCTCCCTACCTGTGACGGTCTGCACCA
>XM_039795079.1
GTTGTGTGTTTGGCTTGATGTTTGATGCTGACACGAAGAGAAGGAAGTCTGTAAAGCCACAGATTACTGCCCATGTTCTGAGCGGTTGCACTATAATGTTCAGCAGCCACGAGGTGAATGACGTCGGAGGGTCTTAACAGCGGAAAAAGCTGTCGGTGATGTCCAGAtctcagacacagacagactgaaGCTCCCTCCCATCATGGACTCCAAGAAGCCTGGCATGCTGCGGCATCTCCGCCAGAAGATGCTGCCACACCTCCGGCGAGACAAGACGAGCCCCGGCAAGCACCTGGTTCAGCTCGAACACCCAATGGACCATCGGATGAGCTCCTCCGTTCCCGACATGAGGAACATGAGGCAGCACGAGTATGCTCCCGTCTCCTCCAGCATGCAGCCCCAACAGTACGACTCTCCCAGCTACAGCAACCCCTGCTCCCCACTCGTCAGGCCTGCCCGGGGCCTGGGAGGAGGTGGGAGTGGCCTGACGATGGGAGTAGTTGGTGGAGGAGTGGGGAGAAGTGTGCCTGCAGACTGCACAGACTGGGCTTCCTCCCATGAGTCATTCAGCAGTCTCTGTGACGAGGACAAGAGCTCTCCAGAGACAACCTGCAGACCTCCCCGGGGCATGGAGCCTGAGGAGCTGGGCCTACCCGAGATGATGACTGTCTACAGCCCAGACCCTCCCTCTGTGGAGGTGTCCCAGGACAGCTCACAGTATGATAACGATTTCAACAGTCACGGGTTAAAAGACGGGGACAACCAAAATTGTGAGATGGGCAACGAGGTTCTGAGTGTGTCGGAGAACATCAGGGATCCTCCCAGGTCCTTCCTGCTCACCATCCACCTGAAGGAAGGACGCAACCTGGTCATCAGGGACCGCTGTGGTACCAGCGATCCTTATGTGAAATTCAAATTGGACGGGAAAACATTCTACAAAAGCAAAGTGGTTTATAAAGACCTCAACCCCAAATGGAACGAGACCTTCTCCCTACCTGTGACGGTCTTTCTGGTCCTGCGTCATGTGTGGTCTTTCTCTTCGGGAGGCTCTTCTCAGAGCTGCCGTCTGTCGGAGACACTGAGGAAGAATCAGCTGTGGACTTCTGTTGTGTCAGTGACTCTGGTCGGGGGTCAGGAGCTGCCACTGGACTCCCATGGAGGTCAGCTCTTTGTTCGCTTCAGACTGGGAGAGCAGAGCTACAAAAGCAAGGACCGCTGCAGAGTGTCCAACCCTCAGTGGAGAGAGAGGTTCACTTTTAACCTGTTCGTGGACAGGTCTGGCATCCTGGAGGTGGAGCTCTGGTCCAAGGAAGGACGCAGGAACGAGGAGTGTTTGGGAACGTGTGAAGTTGACCTGTCCAAGGTCCCTTTCAATCAGAGACAGCTGTACACACACGCCCTGGACCAGGGGAGAGGACGCTTGGTCTTCCTACTTACACTGAACACATGCAGCGGCGTCTCCATCTCGGACCTGTGTGCCGCACCGCTCGATGAGCCTCACGAACAACAGAACCAGCTGGACAGCTATAGTTTGAAAAGGTCCCTGAAAAACCTCAGCGATGTTGGTTTCCTTCAAATCAAAGTGATTAAGGCCGCAGATTTGCTGTCTGCTGATTTAAACGGCAAGAGTGATCCCTTCTGTGTGTTGGAGCTGGGGAACGACCGACTGCAGACCCACACGGTCTACAAGAGCCTCCACCCAGAGTGGAAACAAGTCTTCACATTCCCTGTCAAAGACATTCATGAGGTTCTGGTGGTGACTATCTTTGATGAGGACGGAGACAAGGCGCCAGACTTCCTGGGAAAGGTTGCCATTCCCCTGCTCTCGATCCGCAGGGGACAGCAGATCGCCTACCCTCTGAAGAAAGAGGACTTAGGTGGGCTGTCGAAGGGGAGCATCACTCTGGAGCTGCAGGTTATTTTTAACCCTGTCAGAGCGGGTATAAAAACCTTCCAACCAAGAGAAAGAAGATTCATAGAGGATACTCCCAAGTTTTCTAAAAAGGTCCTGGCCAGGAACGTGCTCCGTGTTCAGACACTGTACAGGGCTATCATGTCGACTCTGCAGTACATCAAAAGCTGTTTCCAGTGGGAGAGCATTCAGAGAAGCCTGCTAGCCTTCCTGGTGTTTTTGGTGACCGTGTGGAACTGGGAGTTTTACATGCTACCCCTCTTCCTGGTCCTGCTCATCTCGTGGAACTACCTCCAGATCCAGTCGGGTCGGGTCAGTCAGGACTTGgacaaTATGGATTTGGGGGATGAGGACGAGGATGATGAAAAGGAGTCTGAGAGAAGAGGGCTGATGGAGAAAATCCACATGGTCCAAGAAACCATCATCACCCTTCAAAACCTTCTGGATAGCATCGCATGTTTTGGGGAGAGGATTAAAAACACTTTCAACTGGTCGGTGCCGTTCCTGTCCAGCCTGGCTTTCCTGGTCTTTGTCACTGCAACAATCCTTACATACTACATCCCTGTTCGCTACGTGGTTTTAATATGGGGCATCAATAAATTCACCAAGAAATTACGGAACCCATACAGCATTGACAACAATGAAGTGCTTGATTTCCTGACGAGGGTGCCTTCAGATGTGCAGAAGGTTCAGTACAGTGAAATGAGAGGCAGCAGGAGGAAGAAACTCAGTAGGCTTCctacttaaaaacagtttccACAGGATCTGCGTGGTAGGGTTGGATTTTAATTCGCTGTGGAGATACACAGCTCAGCACCATTCATATCAACCGGCACATACTGTAAAGACCTTTCCCAAGAAGAAACCAAAGAAGTCCACACGGAGAAGCCCATAGAGATTCCAGATTACAATGTACAAAGATTGTAgatgtttttattgtatgtaCAGTTTATTCTTCAAGATAATCGATCACAAGttgctgtttttatattttctggCCCCAGGTTGTGTCCTCCTGAAACCAGCCGAAATATTATTGAATACATTATATTGAATGTATATGCTTTGGTATGTAAcatttgtgtgtatatttttaCATCATTTGCATTGGCAGATGTGCAGACTTTTATTCCAAAATGGATTatgcacctttttaaaaaaaaaaaaagaaaatgggatGAAAGTGGATTTCATCATGGGttccttttttaaaaagtacaaGTCATCATTTTTAAGGTCTTTGTGGTTTTAAATATTATGATGAATTTGAGGAAACAATTATTGAGCCTTTCATATTCCCATATACAACATAAGTCAGTAGCAAATATTCTGCATTGTATTCCTTTATTTCTTACTTTTACCTTTGAAAATGGATAAAGATTTAAGATTTCACTTCaaggtgacttttttttttttgcatgcaaAGATGAGTGCctatatatttagttttatttttctattcgTCCTATATAGAGGGTGCACTGTACGGTTTTATTTTACACTTTGCTTGTAAGTGGGATAGGGCCAAATCTATACACACGTAACTTTATTTATTCACAACAATCAGTGATGAATACTTTGTGTCTCCCATTTCTAACCGCAATAAATGCACACAATCACAGTTTAGCATA

Function

symbol description
mctp2 Enables calcium ion binding activity. Predicted to be involved in regulation of neurotransmitter secretion. Located in cytosol and nucleoplasm. Is integral component of membrane.

NR:

description
PREDICTED: multiple C2 and transmembrane domain-containing protein 2 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU33668 False 996 TUCP 0.56 5 1431968 1457091
TU33669 False 934 TUCP 0.56 5 1431968 1456472
XM_039795079.1 True 3543 mRNA 0.48 21 1410674 1457108

Neighbor

gene id symbol gene type direction distance location
tdp1 tdp1 coding downstream 207592 1193040 ~ 1203082 (-)
LOC120556384 LOC104919714 coding downstream 219788 1176462 ~ 1190886 (-)
pdpr pdpr coding downstream 354380 1037755 ~ 1056294 (-)
mrpl46 mrpl46 coding downstream 380619 1021963 ~ 1030055 (-)
sv2ba LOC103359500,LOC101162590,LOC101062552 coding downstream 1083946 301918 ~ 326728 (-)
LOC120555617 NA coding upstream 2056 1459164 ~ 1507908 (-)
rhpn2 rhpn2 coding upstream 287084 1744192 ~ 1774421 (-)
lrp3 lrp3 coding upstream 361323 1818431 ~ 1831946 (-)
trnat-agu_3 NA coding upstream 376213 1833321 ~ 1833394 (-)
dnaja2a dnaja2 coding upstream 377980 1835088 ~ 1846922 (-)
G24988 NA non-coding downstream 131857 1278569 ~ 1278817 (-)
G24987 LOC102205592,LOC101476278,LOC102787001,LOC102297232,LOC100534518,LOC101075605 non-coding downstream 143714 1266686 ~ 1266960 (-)
G24978 NA non-coding downstream 156050 1252718 ~ 1254624 (-)
G24974 NA non-coding downstream 167971 1240767 ~ 1242703 (-)
G24955 eprs non-coding downstream 193744 1216526 ~ 1216930 (-)
G25039 NA non-coding upstream 929 1458037 ~ 1458542 (-)
G25110 NA non-coding upstream 203386 1660494 ~ 1660735 (-)
G25111 NA non-coding upstream 203724 1660832 ~ 1661353 (-)
G25112 NA non-coding upstream 204251 1661359 ~ 1661697 (-)
G25113 NA non-coding upstream 204620 1661728 ~ 1662486 (-)
pnoca NA other downstream 305507 1061104 ~ 1105167 (-)
ntrk3b NA other downstream 489125 706157 ~ 921549 (-)
LOC120556048 abcc12,LOC101479372,LOC101076737,LOC102203605,LOC100701509,LOC102304683 other upstream 53057 1510165 ~ 1555646 (-)
LOC120556047 abcc12,LOC102304683,LOC101479372,LOC102203605 other upstream 130436 1587544 ~ 1642348 (-)
cep89 NA other upstream 207662 1664770 ~ 1740839 (-)
G25228 NA other upstream 818367 2275475 ~ 2277091 (-)
LOC120556425 ap2a2,LOC104921433,LOC104965011 other upstream 4222934 5680042 ~ 5717433 (-)

Expression


Co-expression Network